RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 RGPD1P0DJD0 1748 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 VSIG10LQ86VR7 867 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 SLC12A6Q9UHW9 1150 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 INTUQ9ULD6 942 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 ALG6Q9Y672 507 aa13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 MORC2Q9Y6X9 1032 aaPredicted RBP13.94□□□□□ -0.18
PCDHA4-202ENST00000512229 EXOC1LA0A1B0GW35 172 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 GTPBP10A4D1E9 387 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 RRN3P2A6NIE6 340 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TOM1L1O75674 476 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PSMD10O75832 226 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 IL18RAPO95256 599 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TROVE2P10155 538 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 NR1D1P20393 614 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 SLC26A2P50443 739 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 DNAAF3Q8N9W5 541 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 COG1Q8WTW3 980 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PYROXD1Q8WU10 500 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 WDR18Q9BV38 432 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TBK1Q9UHD2 729 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PLAAQ9Y263 795 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CLCN3P51790 818 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PPATQ06203 517 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 EPC2Q52LR7 807 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 THEM5Q8N1Q8 247 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 C4orf32Q8N8J7 132 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TNIP3Q96KP6 325 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 NIF3L1Q9GZT8 377 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 ADAM21Q9UKJ8 722 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 HMGB1P1B2RPK0 211 aaPredicted RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 WEE2P0C1S8 567 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 MAPTP10636 758 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PDE1BQ01064 536 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TBX2Q13207 712 aaPredicted RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 PRPSAP1Q14558 356 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 SEZ6Q53EL9 994 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 GNASQ5JWF2 1037 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 C6orf118Q5T5N4 469 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 MMS22LQ6ZRQ5 1243 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 TRAPPC11Q7Z392 1133 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 ASCC2Q9H1I8 757 aaPredicted RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 GOLPH3Q9H4A6 298 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 FRMPD4Q14CM0 1322 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CPP00450 1065 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CLTAP09496 248 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 MSH2P43246 934 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 ADCY1Q08828 1119 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CEP57Q86XR8 500 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 MMTAG2Q9BU76 263 aaKnown RBP13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 WDR35Q9P2L0 1181 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 STAP1Q9ULZ2 295 aa13.93□□□□□ -0.18
PCDHA4-202ENST00000512229 CTIFO43310 598 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 RARBP10826 455 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 CCT5P48643 541 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 VGLL4Q14135 290 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 NOA1Q8NC60 698 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 SPATA20Q8TB22 786 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 RASSF4Q9H2L5 321 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 TMEM150BA6NC51 233 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 DHX34Q14147 1143 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 C1orf54Q8WWF1 131 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 DNAJC19Q96DA6 116 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 RGPD2P0DJD1 1756 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 GIPC1O14908 333 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 ADORA2BP29275 332 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 IL9RQ01113 521 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 ADCY2Q08462 1091 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 C1orf186Q6ZWK4 172 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 SV2AQ7L0J3 742 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 PLEKHH3Q7Z736 793 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 ZNF677Q86XU0 584 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 NKX2-3Q8TAU0 364 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 SLC35C1Q96A29 364 aa13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 FHDC1Q9C0D6 1143 aaPredicted RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 ZCCHC17Q9NP64 241 aaKnown RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 TTC7AQ9ULT0 858 aaPredicted RBP13.92□□□□□ -0.18
PCDHA4-202ENST00000512229 SOX10P56693 466 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 CAV1Q03135 178 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 CATSPERGQ6ZRH7 1159 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 GLIS3Q8NEA6 775 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 TAS1R2Q8TE23 839 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 COMTP21964 271 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 GGCXP38435 758 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 ZNF131P52739 623 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 ATP11AP98196 1134 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 TSPY1Q01534 308 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 STILQ15468 1287 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 LRRC8CQ8TDW0 803 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 GTF3C4Q9UKN8 822 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 CAPN6Q9Y6Q1 641 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 PPP1R11O60927 126 aaPredicted RBP13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 CTSHP09668 335 aa13.91□□□□□ -0.18
PCDHA4-202ENST00000512229 ITGB5P18084 799 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms