RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 MBTPS2O43462 519 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 ZNF862O60290 1169 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 MMP1P03956 469 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 CHMLP26374 656 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 MAOBP27338 520 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 CD52P31358 61 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 NASPP49321 788 aaPredicted RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 GATMP50440 423 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 IGBP1P78318 339 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 NHLH1Q02575 133 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 TMEM62Q0P6H9 643 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 BTG3Q14201 252 aaPredicted RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 SMAD2Q15796 467 aaKnown RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 TAF2Q6P1X5 1199 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 ADGRD2Q7Z7M1 963 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 RTN4RL1Q86UN2 441 aaPredicted RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 SRBD1Q8N5C6 995 aaKnown RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 NCOA7Q8NI08 942 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 TRAPPC12Q8WVT3 735 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 GATAD2BQ8WXI9 593 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 FBXL18Q96ME1 805 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 PCYT2Q99447 389 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 FAM49AQ9H0Q0 323 aaPredicted RBP7.6□□□□□ -1.19
COPS4-209ENST00000511653 MIR1-1HGQ9H1L0 117 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 CYP8B1Q9UNU6 501 aa7.6□□□□□ -1.19
COPS4-209ENST00000511653 SGSM2O43147 1006 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 DGKIO75912 1065 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 ITGB1P05556 798 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 RB1P06400 928 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 MRPS6P82932 125 aaKnown RBP7.59□□□□□ -1.19
COPS4-209ENST00000511653 SMAD4Q13485 552 aaKnown RBP7.59□□□□□ -1.19
COPS4-209ENST00000511653 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
COPS4-209ENST00000511653 POU4F3Q15319 338 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 PAN2Q504Q3 1202 aaKnown RBP7.59□□□□□ -1.19
COPS4-209ENST00000511653 SEZ6Q53EL9 994 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 XRRA1Q6P2D8 792 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 TSHZ1Q6ZSZ6 1077 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 NLRX1Q86UT6 975 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 CACTIN-AS1Q8N1I8 211 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 RRP36Q96EU6 259 aaKnown RBP7.59□□□□□ -1.19
COPS4-209ENST00000511653 LMAN2LQ9H0V9 348 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 ERAP1Q9NZ08 941 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 UBIAD1Q9Y5Z9 338 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 CEP250Q9BV73 2442 aa7.59□□□□□ -1.19
COPS4-209ENST00000511653 FAM229AH3BQW9 127 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 SH2B2O14492 632 aaPredicted RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 CILPO75339 1184 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 DDAH1O94760 285 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 WISP1O95388 367 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 GLP2RO95838 553 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 INSRRP14616 1297 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 LIG1P18858 919 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 MRE11P49959 708 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 APOBRQ0VD83 1088 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 MTMR1Q13613 665 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 GNL2Q13823 731 aaKnown RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 INPP5AQ14642 412 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 SF3A1Q15459 793 aaKnown RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 SVOPQ8N4V2 548 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 CTCFLQ8NI51 663 aaPredicted RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 CYP2W1Q8TAV3 490 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 UBASH3BQ8TF42 649 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 SEPT1Q8WYJ6 367 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 GLG1Q92896 1179 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 CUL5Q93034 780 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 PGBD1Q96JS3 809 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 MSLNLQ96KJ4 702 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 CLEC1BQ9P126 229 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 SEC63Q9UGP8 760 aaKnown RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 PLAGL2Q9UPG8 496 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 FAM50BQ9Y247 325 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 RWDD3Q9Y3V2 267 aa7.58□□□□□ -1.2
COPS4-209ENST00000511653 RBM8AQ9Y5S9 174 aaKnown RBP7.58□□□□□ -1.2
COPS4-209ENST00000511653 LOC100289279A0A1B0GTE1 492 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PRC1O43663 620 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 IBSPP21815 317 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 NDUFV1P49821 464 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 RBM10P98175 930 aaKnown RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 ADAM15Q13444 863 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PLCB4Q15147 1175 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 TMEM266Q2M3C6 531 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 HERC4Q5GLZ8 1057 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 CCDC81Q6ZN84 652 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 RSPH3Q86UC2 560 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 SLITRK4Q8IW52 837 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 KLHL23Q8NBE8 558 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 GIMAP8Q8ND71 665 aaPredicted RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 SPPL3Q8TCT6 385 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 MAP4K1Q92918 833 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 NKD1Q969G9 470 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 YTHDC1Q96MU7 727 aaKnown RBP7.57□□□□□ -1.2
COPS4-209ENST00000511653 MAP3K14Q99558 947 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 LRRC2Q9BYS8 371 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 TMX1Q9H3N1 280 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 SMARCAD1Q9H4L7 1026 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 PSTPIP2Q9H939 334 aa7.57□□□□□ -1.2
COPS4-209ENST00000511653 JADE2Q9NQC1 790 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms