RNA–Protein interactions for RNA: ENST00000511538.5

GATB-208, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 2

Gene GATB, Length 1,345 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-208ENST00000511538 HOXD13P35453 343 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 OSTNP61366 133 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 SOX4Q06945 474 aaPredicted RBP16.99■□□□□ 0.31
GATB-208ENST00000511538 COASYQ13057 564 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
GATB-208ENST00000511538 ZBTB6Q15916 424 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 DUSP6Q16828 381 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 ZBTB41Q5SVQ8 909 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 VN1R2Q8NFZ6 395 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 RABGGTAQ92696 567 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 HPS3Q969F9 1004 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 HVCN1Q96D96 273 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 TMEM169Q96HH4 297 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 SNX27Q96L92 541 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 ASB2Q96Q27 587 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 TCF25Q9BQ70 676 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 LRRC27Q9C0I9 530 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 GOLPH3LQ9H4A5 285 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 UBE2ZQ9H832 354 aaPredicted RBP16.99■□□□□ 0.31
GATB-208ENST00000511538 CNTN3Q9P232 1028 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 ANK1P16157 1881 aa16.99■□□□□ 0.31
GATB-208ENST00000511538 TCF20Q9UGU0 1960 aaKnown RBP16.99■□□□□ 0.31
GATB-208ENST00000511538 TTC26A0AVF1 554 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 C2orf71A6NGG8 1288 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 PER2O15055 1255 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 TNFSF9P41273 254 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 OR1G1P47890 313 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 NDUFA8P51970 172 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 AMPD3Q01432 767 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 CUL4BQ13620 913 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 TMEM184AQ6ZMB5 413 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 EPM2AIP1Q7L775 607 aaPredicted RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 TMC7Q7Z402 723 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 APBB1IPQ7Z5R6 666 aaPredicted RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 GRAMD1CQ8IYS0 662 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 EFHBQ8N7U6 833 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 GPR62Q9BZJ7 368 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 MRPL44Q9H9J2 332 aaKnown RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 CHST7Q9NS84 486 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 CLEC1BQ9P126 229 aa16.98■□□□□ 0.31
GATB-208ENST00000511538 PRG3Q9Y2Y8 225 aaPredicted RBP16.98■□□□□ 0.31
GATB-208ENST00000511538 OGTO15294 1046 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 NCK2O43639 380 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 CSPG5O95196 566 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 CXCL14O95715 111 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 NRIP1P48552 1158 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 LIG4P49917 911 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 MRPS5P82675 430 aaKnown RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 RBM10P98175 930 aaKnown RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 SKIV2LQ15477 1246 aaKnown RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 PLPP4Q5VZY2 271 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 CRELD2Q6UXH1 353 aaPredicted RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 RBM23Q86U06 439 aaKnown RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 CCDC65Q8IXS2 484 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 MICAL1Q8TDZ2 1067 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 MSLNLQ96KJ4 702 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 RPS6KC1Q96S38 1066 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 BLZF1Q9H2G9 400 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 ANKFY1Q9P2R3 1169 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 CPSF3Q9UKF6 684 aaKnown RBP16.97■□□□□ 0.31
GATB-208ENST00000511538 PCDHB13Q9Y5F0 798 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 VWA8A3KMH1 1905 aa16.97■□□□□ 0.31
GATB-208ENST00000511538 PVALEFA0A1B0GWK0 134 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 HNRNPDLO14979 420 aaKnown RBP16.96■□□□□ 0.31
GATB-208ENST00000511538 SOD2P04179 222 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 CLTAP09496 248 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 AFMP43652 599 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 KCNQ1P51787 676 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 LEXMQ3ZCV2 418 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 GLRA4Q5JXX5 417 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 UNC13DQ70J99 1090 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 ZNF507Q8TCN5 953 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 AUTS2Q8WXX7 1259 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 PYM1Q9BRP8 204 aaKnown RBP16.96■□□□□ 0.31
GATB-208ENST00000511538 COLEC11Q9BWP8 271 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 IGFLR1Q9H665 355 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 TLE6Q9H808 572 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 PLEKHA5Q9HAU0 1116 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 TOPORSQ9NS56 1045 aaPredicted RBP16.96■□□□□ 0.31
GATB-208ENST00000511538 USP25Q9UHP3 1055 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 ADAM28Q9UKQ2 775 aa16.96■□□□□ 0.31
GATB-208ENST00000511538 CIZ1Q9ULV3 898 aaPredicted RBP16.96■□□□□ 0.31
GATB-208ENST00000511538 CASTOR2A6NHX0 329 aa16.96■□□□□ 0.3
GATB-208ENST00000511538 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.3
GATB-208ENST00000511538 TBX10O75333 385 aa16.96■□□□□ 0.3
GATB-208ENST00000511538 PRPF6O94906 941 aaKnown RBP16.96■□□□□ 0.3
GATB-208ENST00000511538 HARSP12081 509 aaKnown RBP16.96■□□□□ 0.3
GATB-208ENST00000511538 HSP90AA2PQ14568 343 aaPredicted RBP16.96■□□□□ 0.3
GATB-208ENST00000511538 SMC1AQ14683 1233 aaKnown RBP16.96■□□□□ 0.3
GATB-208ENST00000511538 PTPN14Q15678 1187 aa16.96■□□□□ 0.3
GATB-208ENST00000511538 ENOX2Q16206 610 aaKnown RBP16.96■□□□□ 0.3
GATB-208ENST00000511538 UPP1Q16831 310 aa16.96■□□□□ 0.3
GATB-208ENST00000511538 TMEM130Q8N3G9 435 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms