RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ATF7IP2Q5U623 682 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 SLC27A1Q6PCB7 646 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 EPM2AIP1Q7L775 607 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 MAP4K3Q8IVH8 894 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 EFHBQ8N7U6 833 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 KIAA0895Q8NCT3 520 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 GSTCDQ8NEC7 633 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 URGCPQ8TCY9 931 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 HVCN1Q96D96 273 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 IGSF21Q96ID5 467 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ACO2Q99798 780 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 TLE6Q9H808 572 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ENTPD7Q9NQZ7 604 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 CLEC1BQ9P126 229 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 CACNG4Q9UBN1 327 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 HOOK1Q9UJC3 728 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 BARX2Q9UMQ3 279 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 PCDHA5Q9Y5H7 936 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 NCOR1O75376 2440 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
SH3TC1-220ENST00000511002 TRIP11Q15643 1979 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 INPPL1O15357 1258 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 RHOBTB3O94955 611 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 SCP2P22307 547 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 NCBP1Q09161 790 aaKnown RBP17■□□□□ 0.31
SH3TC1-220ENST00000511002 STK4Q13043 487 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 DUSP6Q16828 381 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
SH3TC1-220ENST00000511002 COLGALT2Q8IYK4 626 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 SPATA20Q8TB22 786 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 SMARCE1Q969G3 411 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 BICD1Q96G01 975 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 TMEM169Q96HH4 297 aa17■□□□□ 0.31
SH3TC1-220ENST00000511002 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
SH3TC1-220ENST00000511002 PUF60Q9UHX1 559 aaKnown RBP17■□□□□ 0.31
SH3TC1-220ENST00000511002 GRXCR2A6NFK2 248 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 TISP43B9A030 160 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 TNFRSF10AO00220 468 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ABLIM1O14639 778 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 NRP1O14786 923 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 HNRNPDLO14979 420 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 N4BP3O15049 544 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 SMC2O95347 1197 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 MBD3O95983 291 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 PIGRP01833 764 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 HOXD13P35453 343 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 NDUFV1P49821 464 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 KRT17Q04695 432 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 DSC1Q08554 894 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ALCAMQ13740 583 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 KCNB1Q14721 858 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 SLC39A4Q6P5W5 647 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 TMC7Q7Z402 723 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 SCFD1Q8WVM8 642 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 CCDC47Q96A33 483 aaKnown RBP16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ZBTB45Q96K62 511 aaPredicted RBP16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 MSLNLQ96KJ4 702 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ACCSQ96QU6 501 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ZBP1Q9H171 429 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 NUP62CLQ9H1M0 184 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 PTPRHQ9HD43 1115 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 SNTG2Q9NY99 539 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 PARP2Q9UGN5 583 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 TNFSF13BQ9Y275 285 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 GDAQ9Y2T3 454 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 GIT1Q9Y2X7 761 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 PCDHB13Q9Y5F0 798 aa16.99■□□□□ 0.31
SH3TC1-220ENST00000511002 C2orf71A6NGG8 1288 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 EIF3DO15371 548 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 MBTPS2O43462 519 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 NCK2O43639 380 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 PROZP22891 400 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 ABCD1P33897 745 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 LIG4P49917 911 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 PSMD2Q13200 908 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 KCNC3Q14003 757 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 ZNF568Q3ZCX4 644 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 STXBP4Q6ZWJ1 553 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 NELFCDQ8IXH7 590 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 RSPH1Q8WYR4 309 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 RABGGTAQ92696 567 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 PPP2R3CQ969Q6 453 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 GSDMAQ96QA5 445 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 HAPLN2Q9GZV7 340 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 CDT1Q9H211 546 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 KANSL3Q9P2N6 904 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 MAN1B1Q9UKM7 699 aa16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 PRG3Q9Y2Y8 225 aaPredicted RBP16.98■□□□□ 0.31
SH3TC1-220ENST00000511002 UBE4BO95155 1302 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms