RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 A0A0U1RQF3 1178 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 LYPLA2O95372 231 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 SRGAP2CP0DJJ0 459 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 PBX3P40426 434 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 LAMTOR4Q0VGL1 99 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 LONRF3Q496Y0 759 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 CATSPER4Q7RTX7 472 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 NOSTRINQ8IVI9 506 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 COLGALT1Q8NBJ5 622 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 NEK9Q8TD19 979 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 PIGOQ8TEQ8 1089 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 PSPC1Q8WXF1 523 aaKnown RBP9.57□□□□□ -0.88
PDPN-209ENST00000510906 PABPC5Q96DU9 382 aaKnown RBP9.57□□□□□ -0.88
PDPN-209ENST00000510906 HSH2DQ96JZ2 352 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 INO80BQ9C086 356 aaPredicted RBP9.57□□□□□ -0.88
PDPN-209ENST00000510906 FOXP1Q9H334 677 aaPredicted RBP9.57□□□□□ -0.88
PDPN-209ENST00000510906 MINDY3Q9H8M7 445 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 CHST12Q9NRB3 414 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 CLDND1Q9NY35 253 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 DACT1Q9NYF0 836 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 FAM13BQ9NYF5 915 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 PIN4Q9Y237 131 aaKnown RBP9.57□□□□□ -0.88
PDPN-209ENST00000510906 PPME1Q9Y570 386 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 PCDHB12Q9Y5F1 795 aa9.57□□□□□ -0.88
PDPN-209ENST00000510906 LOXHD1Q8IVV2 1947 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 NCOR1O75376 2440 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 MEIS3P2A8K0S8 358 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 LINC01565O15544 149 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 GAS2O43903 313 aaKnown RBP9.56□□□□□ -0.88
PDPN-209ENST00000510906 FGF18O76093 207 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 SPATA31C1P0DKV0 1188 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 IL9P15248 144 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 LAG3P18627 525 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 MSX1P28360 303 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 LTBRP36941 435 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 RARRES1P49788 294 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 DLX2Q07687 328 aaPredicted RBP9.56□□□□□ -0.88
PDPN-209ENST00000510906 GNL2Q13823 731 aaKnown RBP9.56□□□□□ -0.88
PDPN-209ENST00000510906 TTC38Q5R3I4 469 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 TWF2Q6IBS0 349 aaKnown RBP9.56□□□□□ -0.88
PDPN-209ENST00000510906 ADGRD2Q7Z7M1 963 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 FERMT3Q86UX7 667 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 EXOC8Q8IYI6 725 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 THNSL1Q8IYQ7 743 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 ABI1Q8IZP0 508 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 LRRC43Q8N309 656 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 RNF149Q8NC42 400 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 ASAP3Q8TDY4 903 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 TCP11Q8WWU5 503 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 LPPQ93052 612 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 CRISPLD1Q9H336 500 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 IGFLR1Q9H665 355 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 TIMMDC1Q9NPL8 285 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 AAASQ9NRG9 546 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 ANKEF1Q9NU02 776 aa9.56□□□□□ -0.88
PDPN-209ENST00000510906 RALGAPA2Q2PPJ7 1873 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 NLRC5Q86WI3 1866 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 BAHCC1Q9P281 2608 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 C5orf42Q9H799 3197 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 WDR81Q562E7 1941 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 USO1O60763 962 aaKnown RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 TBX10O75333 385 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 MED24O75448 989 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 EOMESO95936 686 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 OR52Z1P0C646 297 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 HOXA11P31270 313 aaPredicted RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 TECP42680 631 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 ERVFC1P60507 584 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 PLCB3Q01970 1234 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 ORC2Q13416 577 aaPredicted RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 CLUL1Q15846 466 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 UBXN11Q5T124 520 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 KCNT2Q6UVM3 1135 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 BTLAQ7Z6A9 289 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 SRGAP1Q7Z6B7 1085 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 RBM23Q86U06 439 aaKnown RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 CATSPER3Q86XQ3 398 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 GPR152Q8TDT2 470 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 ZFP42Q96MM3 310 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 CCDC43Q96MW1 224 aaKnown RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 ZNF558Q96NG5 402 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 UPF2Q9HAU5 1272 aaKnown RBP9.55□□□□□ -0.88
PDPN-209ENST00000510906 CD320Q9NPF0 282 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 AGPAT5Q9NUQ2 364 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 DNMT3LQ9UJW3 386 aa9.55□□□□□ -0.88
PDPN-209ENST00000510906 TCF20Q9UGU0 1960 aaKnown RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 ASAP2O43150 1006 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 NCK2O43639 380 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 RPLP1P05386 114 aaKnown RBP9.54□□□□□ -0.88
PDPN-209ENST00000510906 RHOQP17081 205 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 GLRA2P23416 452 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 U2AF2P26368 475 aaKnown RBP eCLIP9.54□□□□□ -0.88
PDPN-209ENST00000510906 ARL2P36404 184 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 NRIP1P48552 1158 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 TRAPPC10P48553 1259 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 IDH3AP50213 366 aa9.54□□□□□ -0.88
PDPN-209ENST00000510906 TOB1P50616 345 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms