RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900		A0A0D9SFI3	127 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900		F8W810	466 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	BACH1	O14867	736 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	CCL16	O15467	120 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZNF623	O75123	536 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	WFS1	O76024	890 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	HNRNPA1	P09651	372 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	FCAR	P24071	287 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	GPC3	P51654	580 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	FGD1	P98174	961 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	SCAP	Q12770	1279 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	TWF2	Q6IBS0	349 aa	Known RBP	10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ABHD15	Q6UXT9	468 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	AGMO	Q6ZNB7	445 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	LRRC71	Q8N4P6	559 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZC3H10	Q96K80	434 aa	Known RBP	10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	MAP7D2	Q96T17	732 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	SDF4	Q9BRK5	362 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	MKNK1	Q9BUB5	465 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	BRD9	Q9H8M2	597 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ATP13A2	Q9NQ11	1180 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	CHST12	Q9NRB3	414 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ZSWIM5	Q9P217	1185 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	FNIP2	Q9P278	1114 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	POLI	Q9UNA4	740 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	ADAMTS9	Q9P2N4	1935 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	TTC41P	Q6P2S7	1318 aa		10.84	□□□□□ -0.67
PTPN20-223	ENST00000509900	CDX4	O14627	284 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	JUND	P17535	347 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	CCNE1	P24864	410 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	PXN	P49023	591 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	WNT7B	P56706	349 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	SKOR1	P84550	965 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	FAM160B1	Q5W0V3	765 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	EFCAB12	Q6NXP0	572 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	PDXDC2P	Q6P474	469 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	MAP4K3	Q8IVH8	894 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	URGCP	Q8TCY9	931 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	PIBF1	Q8WXW3	757 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	HPS1	Q92902	700 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	ELSPBP1	Q96BH3	223 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	MCRS1	Q96EZ8	462 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	FAM227B	Q96M60	508 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	FAM193B	Q96PV7	902 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	ZNF334	Q9HCZ1	680 aa	Predicted RBP	10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	ZNF302	Q9NR11	478 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	HELLS	Q9NRZ9	838 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	KCNH3	Q9ULD8	1083 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	RAI2	Q9Y5P3	530 aa		10.83	□□□□□ -0.68
PTPN20-223	ENST00000509900	GON4L	Q3T8J9	2241 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	POMC	P01189	267 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	C8A	P07357	584 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	SKI	P12755	728 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	HOXA9	P31269	272 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	GRM4	Q14833	912 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	SEC23A	Q15436	765 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	SLC5A9	Q2M3M2	681 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	PLK5	Q496M5	336 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	PABPC1L	Q4VXU2	614 aa	Known RBP	10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	PPM1L	Q5SGD2	360 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	IFIT1B	Q5T764	474 aa	Known RBP	10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	TRMT1L	Q7Z2T5	733 aa	Known RBP	10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	COLGALT2	Q8IYK4	626 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	GPR62	Q9BZJ7	368 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	TMEM9B	Q9NQ34	198 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	TRPV5	Q9NQA5	729 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	GDE1	Q9NZC3	331 aa		10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	DNMT3B	Q9UBC3	853 aa	Known RBP	10.82	□□□□□ -0.68
PTPN20-223	ENST00000509900	SPAAR	A0A1B0GVQ0	90 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	DDX39A	O00148	427 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	MAGEB2	O15479	319 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CAVIN2	O95810	425 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CCDC192	P0DO97	292 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	NT5C2	P49902	561 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	RAB27A	P51159	221 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	LRRC32	Q14392	662 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	SWSAP1	Q6NVH7	229 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	PRSS55	Q6UWB4	352 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CKAP2L	Q8IYA6	745 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	GPR65	Q8IYL9	337 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CHCHD4	Q8N4Q1	142 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	IRF7	Q92985	503 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CRELD1	Q96HD1	420 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	SCLT1	Q96NL6	688 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	MXRA8	Q9BRK3	442 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	TRMT61B	Q9BVS5	477 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	AGO4	Q9HCK5	861 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	KANSL3	Q9P2N6	904 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	PIN4	Q9Y237	131 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	RAX	Q9Y2V3	346 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	MRPS23	Q9Y3D9	190 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	PCDHB2	Q9Y5E7	798 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	TEP1	Q99973	2627 aa	Known RBP	10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	COL6A6	A6NMZ7	2263 aa		10.81	□□□□□ -0.68
PTPN20-223	ENST00000509900	CCDC163	A0A0D9SF12	145 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms