RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CLIC6Q96NY7 704 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 GPR62Q9BZJ7 368 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 FZD8Q9H461 694 aa16.08■□□□□ 0.16
HMGCL-208ENST00000509389 PRMT7Q9NVM4 692 aaPredicted RBP16.08■□□□□ 0.16
HMGCL-208ENST00000509389 ZMYM2Q9UBW7 1377 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 TTLL13PA6NNM8 815 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 OR52Z1P0C646 297 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 MYBP10242 640 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 PFKFB1P16118 471 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 NUBP1P53384 320 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 GRIK3Q13003 919 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 FAM187BQ17R55 369 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 ZSCAN23Q3MJ62 389 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 FUT10Q6P4F1 479 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 BSNDQ8WZ55 320 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 RABGGTAQ92696 567 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 PRIMPOLQ96LW4 560 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 CLSTN2Q9H4D0 955 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 FAM86C1Q9NVL1 165 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 DPP7Q9UHL4 492 aa16.07■□□□□ 0.16
HMGCL-208ENST00000509389 SPATA31D3P0C874 917 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 RPA1P27694 616 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 LONP1P36776 959 aaKnown RBP16.06■□□□□ 0.16
HMGCL-208ENST00000509389 NDUFA8P51970 172 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 USP41Q3LFD5 358 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 PADI6Q6TGC4 694 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 SPATA31D4Q6ZUB0 917 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 PALB2Q86YC2 1186 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 ZBTB8OSQ8IWT0 167 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 TMEM105Q8N8V8 129 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 ERMNQ8TAM6 284 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 TIGD1Q96MW7 591 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 RHOBTB2Q9BYZ6 727 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 C2orf40Q9H1Z8 148 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 CACNG4Q9UBN1 327 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 ADAM28Q9UKQ2 775 aa16.06■□□□□ 0.16
HMGCL-208ENST00000509389 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 GALR2O43603 387 aaPredicted RBP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 RFPL2O75678 378 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 C1RP00736 705 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 CYP11B2P19099 503 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 FXR2P51116 673 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 TDGQ13569 410 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 GPR65Q8IYL9 337 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 IGSF22Q8N9C0 903 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 PAAF1Q9BRP4 392 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 IRF2BPLQ9H1B7 796 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 PDZD7Q9H5P4 517 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 KCNK12Q9HB15 430 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 WDR6Q9NNW5 1121 aaKnown RBP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGCL-208ENST00000509389 FNIP2Q9P278 1114 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 USP20Q9Y2K6 914 aa16.05■□□□□ 0.16
HMGCL-208ENST00000509389 DOCK8Q8NF50 2099 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 A0A1B0GVL5 298 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 H0Y858 1186 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 N4BP3O15049 544 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 TGM5O43548 720 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 TADA2AO75478 443 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 RPL17P18621 184 aaKnown RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 TUSC3Q13454 348 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 PRPF4BQ13523 1007 aaKnown RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 HSP90AA2PQ14568 343 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 MAPK6Q16659 721 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 ASTLQ6HA08 431 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 SMG7Q92540 1137 aaKnown RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 ATOH1Q92858 354 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 ZNF707Q96C28 371 aaPredicted RBP16.04■□□□□ 0.16
HMGCL-208ENST00000509389 AK8Q96MA6 479 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 NUP62CLQ9H1M0 184 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 CXCL16Q9H2A7 254 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 MFSD1Q9H3U5 465 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 PLEKHA4Q9H4M7 779 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 SNTG2Q9NY99 539 aa16.04■□□□□ 0.16
HMGCL-208ENST00000509389 CLUHO75153 1309 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 ZFHX2Q9C0A1 2572 aaPredicted RBP16.03■□□□□ 0.16
HMGCL-208ENST00000509389 CASTOR2A6NHX0 329 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 ACKR2O00590 384 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 PTGESO14684 152 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 PAPLNO95428 1278 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 EDN1P05305 212 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 PRKCBP05771 671 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 MUTP22033 750 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 NAMPTP43490 491 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 ECM1Q16610 540 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 RTP2Q5QGT7 225 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 LILRA6Q6PI73 481 aa16.03■□□□□ 0.16
HMGCL-208ENST00000509389 DEPTORQ8TB45 409 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms