RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DSC1Q08554 894 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 TFDP1Q14186 410 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 SEZ6Q53EL9 994 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 ZC2HC1CQ53FD0 456 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 SCARA3Q6AZY7 606 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 LYPD8Q6UX82 237 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 CD300LGQ6UXG3 332 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 DYMQ7RTS9 669 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 RNF168Q8IYW5 571 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC39A11Q8N1S5 342 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 LRRC43Q8N309 656 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 FIBCD1Q8N539 461 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 FAM160A2Q8N612 972 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 KLHL23Q8NBE8 558 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 DEPTORQ8TB45 409 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 DHX58Q96C10 678 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 CCDC51Q96ER9 411 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 PRIMPOLQ96LW4 560 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 GAD1Q99259 594 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 ACO2Q99798 780 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 APOL6Q9BWW8 343 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 ALG13Q9NP73 1137 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 CHST12Q9NRB3 414 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 PRMT7Q9NVM4 692 aaPredicted RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 KBTBD4Q9NVX7 518 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 KLK14Q9P0G3 267 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 STK17AQ9UEE5 414 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 INPP5FQ9Y2H2 1132 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 TDRD15B5MCY1 1934 aaKnown RBP7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 TRIP11Q15643 1979 aa7.93□□□□□ -1.14
TOPBP1-207ENST00000509162 TTC28Q96AY4 2481 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 PLXNA3P51805 1871 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 A0A1B0GVL5 298 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 CARNS1A5YM72 827 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ARL5CA6NH57 179 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 NT5C1B-RDH14C9J2C7 533 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ANKRD63C9JTQ0 380 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 K7ENM7 598 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 LINC01565O15544 149 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ATP9BO43861 1147 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ERLIN2O94905 339 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 GLP2RO95838 553 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 POMCP01189 267 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 PIGRP01833 764 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 TNFSF9P41273 254 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 STAT6P42226 847 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 RAB27AP51159 221 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 NDUFA8P51970 172 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 COASYQ13057 564 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 PRPF4BQ13523 1007 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ELOAQ14241 798 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 GLRA4Q5JXX5 417 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 NOTUMQ6P988 496 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 SLC27A1Q6PCB7 646 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 MAP4K3Q8IVH8 894 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 MICALL1Q8N3F8 863 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 C3orf58Q8NDZ4 430 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 SPPL3Q8TCT6 385 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 KCNG4Q8TDN1 519 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 RABGGTAQ92696 567 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 CALML4Q96GE6 196 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 CDK5RAP3Q96JB5 506 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 DRC1Q96MC2 740 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ZNF396Q96N95 335 aaPredicted RBP7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 TRIM9Q9C026 710 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 C2orf40Q9H1Z8 148 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 BLZF1Q9H2G9 400 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 RSAD1Q9HA92 442 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 KMT5AQ9NQR1 393 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 SNTG2Q9NY99 539 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 ODF2LQ9ULJ1 636 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 PCDHB7Q9Y5E2 793 aa7.92□□□□□ -1.14
TOPBP1-207ENST00000509162 CCDC169A6NNP5 214 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 POLR2DO15514 142 aaKnown RBP7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 GDF9O60383 454 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 TBX10O75333 385 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 FGF18O76093 207 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 EOMESO95936 686 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 STAG3L1P0CL83 205 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 ZSCAN20P17040 1043 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 IGFBP4P22692 258 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 ADSSP30520 456 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 AXLP30530 894 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 BCAR1P56945 870 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 ERVFC1P60507 584 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 CDC42EP1Q00587 391 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 NR1H3Q13133 447 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 DMP1Q13316 513 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 GPM6BQ13491 265 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 CUL4BQ13620 913 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 CCDC85BQ15834 202 aaPredicted RBP7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 MAPK6Q16659 721 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 XKR4Q5GH76 650 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 TCEAL5Q5H9L2 206 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 NOMO2Q5JPE7 1267 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 ATF7IP2Q5U623 682 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 RRAGBQ5VZM2 374 aa7.91□□□□□ -1.14
TOPBP1-207ENST00000509162 KCNT2Q6UVM3 1135 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms