RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 RUSC1Q9BVN2 902 aa13.75□□□□□ -0.21
PDPN-208ENST00000509009 KCNK12Q9HB15 430 aa13.75□□□□□ -0.21
PDPN-208ENST00000509009 PTPRHQ9HD43 1115 aa13.75□□□□□ -0.21
PDPN-208ENST00000509009 RBM19Q9Y4C8 960 aaKnown RBP13.75□□□□□ -0.21
PDPN-208ENST00000509009 ZFHX2Q9C0A1 2572 aaPredicted RBP13.75□□□□□ -0.21
PDPN-208ENST00000509009 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
PDPN-208ENST00000509009 SMIM28A0A1B0GU29 152 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 GJB2P29033 226 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 MRE11P49959 708 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 PTPN5P54829 565 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 CREMQ03060 361 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
PDPN-208ENST00000509009 TDGQ13569 410 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 XKR4Q5GH76 650 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 HYIQ5T013 277 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 DCLRE1AQ6PJP8 1040 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 CD300LGQ6UXG3 332 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 ALKAL1Q6UXT8 129 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 TAS1R3Q7RTX0 852 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 APBB1IPQ7Z5R6 666 aaPredicted RBP13.74□□□□□ -0.21
PDPN-208ENST00000509009 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 PPP1R10Q96QC0 940 aaKnown RBP13.74□□□□□ -0.21
PDPN-208ENST00000509009 TARS2Q9BW92 718 aaKnown RBP13.74□□□□□ -0.21
PDPN-208ENST00000509009 PRKD2Q9BZL6 878 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
PDPN-208ENST00000509009 H3BQV1 296 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 ADAM12O43184 909 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 ZMYND10O75800 440 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 GUCY2CP25092 1073 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 GRM5P41594 1212 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 DMP1Q13316 513 aaPredicted RBP13.73□□□□□ -0.21
PDPN-208ENST00000509009 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
PDPN-208ENST00000509009 PSMD5Q16401 504 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 GLRA4Q5JXX5 417 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 KCTD17Q8N5Z5 321 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 SYT2Q8N9I0 419 aaPredicted RBP13.73□□□□□ -0.21
PDPN-208ENST00000509009 STAMQ92783 540 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 MYADMQ96S97 322 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 PHOX2BQ99453 314 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 PLIN2Q99541 437 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 MRPL4Q9BYD3 311 aaKnown RBP13.73□□□□□ -0.21
PDPN-208ENST00000509009 CDT1Q9H211 546 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 PIDD1Q9HB75 910 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 KMT5AQ9NQR1 393 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
PDPN-208ENST00000509009 CLUHO75153 1309 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 ABLIM1O14639 778 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 SLC16A4O15374 487 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 B3GAT3O94766 335 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 FGFR3P22607 806 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 PROZP22891 400 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 GBP2P32456 591 aaPredicted RBP13.72□□□□□ -0.21
PDPN-208ENST00000509009 MCM2P49736 904 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 CLCNKBP51801 687 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 NUBP1P53384 320 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 OSTNP61366 133 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 RAB33AQ14088 237 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 UPP1Q16831 310 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 ARL6IP4Q66PJ3 421 aaKnown RBP13.72□□□□□ -0.21
PDPN-208ENST00000509009 CEP120Q8N960 986 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 ZBTB45Q96K62 511 aaPredicted RBP13.72□□□□□ -0.21
PDPN-208ENST00000509009 TCHPQ9BT92 498 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 TIPINQ9BVW5 301 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 CCDC94Q9BW85 323 aaPredicted RBP13.72□□□□□ -0.21
PDPN-208ENST00000509009 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 FBXW11Q9UKB1 542 aa13.72□□□□□ -0.21
PDPN-208ENST00000509009 PHLPP2Q6ZVD8 1323 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 MCF2P10911 925 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 LAMP2P13473 410 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 PLS3P13797 630 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 CLCN5P51795 746 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 SLC12A3P55017 1021 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 SOX4Q06945 474 aaPredicted RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 RAD51AP2Q09MP3 1159 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 LARP1BQ659C4 914 aaKnown RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 ASTLQ6HA08 431 aaPredicted RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 PDXDC1Q6P996 788 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 RSPO2Q6UXX9 243 aaPredicted RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 SLC44A3Q8N4M1 653 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 TMEM105Q8N8V8 129 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 TMEM161BQ8NDZ6 487 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 SPIRE2Q8WWL2 714 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 RSAD2Q8WXG1 361 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 UROC1Q96N76 676 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 ZMAT2Q96NC0 199 aaKnown RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 ACAP3Q96P50 834 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 UPF2Q9HAU5 1272 aaKnown RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.21
PDPN-208ENST00000509009 TOPORSQ9NS56 1045 aaPredicted RBP13.71□□□□□ -0.21
PDPN-208ENST00000509009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms