RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 ITGB8P26012 769 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 COPB1P53618 953 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 UBASH3AP57075 661 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 TFAMQ00059 246 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 FANCCQ00597 558 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 CETN1Q12798 172 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 PSMD6Q15008 389 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 KRT31Q15323 416 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 ENOX2Q16206 610 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 MAN2A1Q16706 1144 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 PSRC1Q6PGN9 363 aaPredicted RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 GLB1LQ6UWU2 654 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 ECHDC2Q86YB7 292 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 IRF2BP1Q8IU81 584 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 CD302Q8IX05 232 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 SMG8Q8ND04 991 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 URGCPQ8TCY9 931 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 TMC2Q8TDI7 906 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 CACTINQ8WUQ7 758 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 LPPQ93052 612 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 MFSD14AQ96MC6 490 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 TRIM5Q9C035 493 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 PLEKHA5Q9HAU0 1116 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 PDE11AQ9HCR9 933 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 KLK14Q9P0G3 267 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 LIMA1Q9UHB6 759 aaKnown RBP11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 INPP5FQ9Y2H2 1132 aa11.96□□□□□ -0.49
BRCC3P1-201ENST00000508559 C9IYK1 514 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 HOXA2O43364 376 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 XPOTO43592 962 aaKnown RBP11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 N4BP1O75113 896 aaKnown RBP11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 ZNF623O75123 536 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 UPP2O95045 317 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TRIM49P0CI25 452 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TRIM49CP0CI26 452 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 BIRC3Q13489 604 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 GPNMBQ14956 572 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TMEM132DQ14C87 1099 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 VWA3BQ502W6 1294 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 OTOP2Q7RTS6 562 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 MRPL10Q7Z7H8 261 aaKnown RBP11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TRIM59Q8IWR1 403 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TMEM192Q8IY95 271 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 PARD3BQ8TEW8 1205 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 CGRRF1Q99675 332 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TRAIPQ9BWF2 469 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 ASB7Q9H672 318 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 RSAD1Q9HA92 442 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 TMEM161AQ9NX61 479 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 IFNKQ9P0W0 207 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 GIT1Q9Y2X7 761 aa11.95□□□□□ -0.5
BRCC3P1-201ENST00000508559 BRCA2P51587 3418 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 TANC1Q9C0D5 1861 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 LRRIQ3A6PVS8 624 aaPredicted RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 FAM189A1O60320 539 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 BAIAP3O94812 1187 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 GCLMP48507 274 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 MRE11P49959 708 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 AP3M2P53677 418 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 MARSP56192 900 aaKnown RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 MYL7Q01449 175 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 UBXN1Q04323 297 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 RNASELQ05823 741 aaKnown RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 KCNH2Q12809 1159 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 DUOXA2Q1HG44 320 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 SLC10A6Q3KNW5 377 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 LMBRD2Q68DH5 695 aaPredicted RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 JADE1Q6IE81 842 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 RTN4RL1Q86UN2 441 aaPredicted RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 WDR49Q8IV35 697 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 BEST2Q8NFU1 509 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 LINC01599Q8WXQ3 324 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 SNX27Q96L92 541 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 FAM193BQ96PV7 902 aaPredicted RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 POP1Q99575 1024 aaKnown RBP11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 NDST4Q9H3R1 872 aa11.94□□□□□ -0.5
BRCC3P1-201ENST00000508559 TTC26A0AVF1 554 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 ARL5CA6NH57 179 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 RBAK-RBAKDNI3L0D1 243 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 THP07101 528 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 GTF2H1P32780 548 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 MLH1P40692 756 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 MXI1P50539 228 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 FAM189BP81408 668 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 ENPEPQ07075 957 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 TRPC3Q13507 836 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 TCTN1Q2MV58 587 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 GLRA4Q5JXX5 417 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 FAM117BQ6P1L5 589 aa11.93□□□□□ -0.5
BRCC3P1-201ENST00000508559 AGMOQ6ZNB7 445 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms