RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 ALOX15P16050 662 aaPredicted RBP6.67□□□□□ -1.34
GYPA-205ENST00000508337 RABGGTBP53611 331 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 ODF1Q14990 250 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 CDSNQ15517 529 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 ANKS6Q68DC2 871 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 ZNF529Q6P280 563 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 TTC7BQ86TV6 843 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 TMPRSS6Q8IU80 811 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 CMTR2Q8IYT2 770 aaKnown RBP6.67□□□□□ -1.34
GYPA-205ENST00000508337 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 OR2I1PQ8NGU4 316 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 JDP2Q8WYK2 163 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 KAT5Q92993 513 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 COA7Q96BR5 231 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 TRPM5Q9NZQ8 1165 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.67□□□□□ -1.34
GYPA-205ENST00000508337 ANKRD6Q9Y2G4 727 aa6.67□□□□□ -1.34
GYPA-205ENST00000508337 KLRG2A4D1S0 409 aaPredicted RBP6.66□□□□□ -1.34
GYPA-205ENST00000508337 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 C1QTNF3-AMACRE9PGA6 284 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 TRIM24O15164 1050 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 SGTAO43765 313 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 FPR1P21462 350 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 APOBEC3AP31941 199 aaPredicted RBP6.66□□□□□ -1.34
GYPA-205ENST00000508337 GUCY1A2P33402 732 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 WASP42768 502 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 RAB39AQ14964 217 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 BMT2Q1RMZ1 405 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 PLEKHG6Q3KR16 790 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 THEMIS2Q5TEJ8 643 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 USP51Q70EK9 711 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 AOPEPQ8N6M6 819 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 CLPTM1LQ96KA5 538 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 DCLRE1CQ96SD1 692 aaKnown RBP6.66□□□□□ -1.34
GYPA-205ENST00000508337 NDC1Q9BTX1 674 aa6.66□□□□□ -1.34
GYPA-205ENST00000508337 C11orf54Q9H0W9 315 aaPredicted RBP6.66□□□□□ -1.34
GYPA-205ENST00000508337 PPFIA4O75335 1185 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 SMARCA1P28370 1054 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 SLC6A9P48067 706 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 NHLH2Q02577 135 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 IL10RAQ13651 578 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 RABL3Q5HYI8 236 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 IFIT1BQ5T764 474 aaKnown RBP6.65□□□□□ -1.34
GYPA-205ENST00000508337 UBE3BQ7Z3V4 1068 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 IL17DQ8TAD2 202 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 SLC35B2Q8TB61 432 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 STAG1Q8WVM7 1258 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 KMT5AQ9NQR1 393 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 SERPINB13Q9UIV8 391 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 LIMCH1Q9UPQ0 1083 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
GYPA-205ENST00000508337 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 OFD1O75665 1012 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 AMHP03971 560 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 ITGB1P05556 798 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 C1SP09871 688 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 MTHFD1P11586 935 aaKnown RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 ZSCAN20P17040 1043 aaPredicted RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 RNASE9P60153 205 aaKnown RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 MTM1Q13496 603 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 TUBA3CQ13748 450 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 LSM12Q3MHD2 195 aaKnown RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 NAIF1Q69YI7 327 aaPredicted RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 TUBA3EQ6PEY2 450 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 DRICH1Q6PGQ1 229 aaPredicted RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 MED25Q71SY5 747 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 ZNF276Q8N554 614 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 NLGN4YQ8NFZ3 816 aaPredicted RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 RGMAQ96B86 450 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 MAP3K14Q99558 947 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 NUP88Q99567 741 aaPredicted RBP6.64□□□□□ -1.35
GYPA-205ENST00000508337 ATP11BQ9Y2G3 1177 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 XDHP47989 1333 aa6.64□□□□□ -1.35
GYPA-205ENST00000508337 RPS6KA4O75676 772 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 CD1AP06126 327 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 HLA-DOAP06340 250 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 PCSK1P29120 753 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 PTGS2P35354 604 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 RAB27AP51159 221 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 CHN2P52757 468 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 CTXN1P60606 82 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 MCL1Q07820 350 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 FOXE3Q13461 319 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 OTUD7BQ6GQQ9 843 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 SEM1Q6ZVN7 128 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 GDF7Q7Z4P5 450 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 CATIPQ7Z7H3 387 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 PLXDC1Q8IUK5 500 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 ZGPATQ8N5A5 531 aaKnown RBP6.63□□□□□ -1.35
GYPA-205ENST00000508337 SLC25A43Q8WUT9 341 aaPredicted RBP6.63□□□□□ -1.35
GYPA-205ENST00000508337 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 KCNH6Q9H252 994 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 GNL3LQ9NVN8 582 aaKnown RBP6.63□□□□□ -1.35
GYPA-205ENST00000508337 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
GYPA-205ENST00000508337 FEZ2Q9UHY8 353 aaPredicted RBP6.63□□□□□ -1.35
GYPA-205ENST00000508337 G3BP2Q9UN86 482 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms