RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 C1QL2Q7Z5L3 287 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 BOD1Q96IK1 185 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 PHACTR3Q96KR7 559 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 SPTLC3Q9NUV7 552 aa6.14□□□□□ -1.43
TRAPPC13-209ENST00000508304 CGB1A6NKQ9 187 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 OCRLQ01968 901 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 PITRM1Q5JRX3 1037 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 TSHZ3Q63HK5 1081 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 SYNPOQ8N3V7 929 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 SH2D3CQ8N5H7 860 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 GPR101Q96P66 508 aaPredicted RBP6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 ZSWIM1Q9BR11 485 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 C1QTNF7Q9BXJ2 289 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 KLK15Q9H2R5 256 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 TBCCD1Q9NVR7 557 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 PNPLA7Q6ZV29 1317 aa6.13□□□□□ -1.43
TRAPPC13-209ENST00000508304 A0A1B0GTW7 788 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 KDM1AO60341 852 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 SNRPA1P09661 255 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 CANXP27824 592 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 ABCG1P45844 678 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 MRPS35P82673 323 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 MST1LQ2TV78 715 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 MED25Q71SY5 747 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 ZNF572Q7Z3I7 529 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 LRRTM3Q86VH5 581 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 REPS2Q8NFH8 660 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 FUBP3Q96I24 572 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 PAWRQ96IZ0 340 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 KCTD10Q9H3F6 313 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 LRIT1Q9P2V4 623 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 KCNG1Q9UIX4 513 aa6.12□□□□□ -1.43
TRAPPC13-209ENST00000508304 ATRNL1Q5VV63 1379 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 RPTORQ8N122 1335 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 LSSP48449 732 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 CXADRP78310 365 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 PCBP1Q15365 356 aaKnown RBP eCLIP6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 TRMT2AQ8IZ69 625 aaKnown RBP6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 FAM43AQ8N2R8 423 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 ACTRT2Q8TDY3 377 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 RNF31Q96EP0 1072 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 GALNT9Q9HCQ5 603 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 CASS4Q9NQ75 786 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 KMT5AQ9NQR1 393 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 SLC17A6Q9P2U8 582 aa6.11□□□□□ -1.43
TRAPPC13-209ENST00000508304 LOC105371045A0A1W2PR82 267 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 WNT10BO00744 389 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 PHF2O75151 1096 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 ALOX15P16050 662 aaPredicted RBP6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 LGALS4P56470 323 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 SEPT7Q16181 437 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 C9orf106Q8NAJ2 232 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 NACC2Q96BF6 587 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 AIFM2Q9BRQ8 373 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 SLC29A3Q9BZD2 475 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 REXO4Q9GZR2 422 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 RNPEPQ9H4A4 650 aa6.1□□□□□ -1.43
TRAPPC13-209ENST00000508304 CCDC78A2IDD5 438 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 LPLP06858 475 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 FGFR4P22455 802 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 PTPN7P35236 360 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 SCNN1BP51168 640 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 PROK1P58294 105 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 DRC7Q8IY82 874 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 ZNF778Q96MU6 729 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 ARPP21Q9UBL0 812 aaPredicted RBP6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 KCNE5Q9UJ90 142 aa6.09□□□□□ -1.43
TRAPPC13-209ENST00000508304 GCSHP23434 173 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 ADCYAP1R1P41586 468 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 ZNF81P51508 661 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 RAP2BP61225 183 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 SP140Q13342 867 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 SART3Q15020 963 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 CYP2A13Q16696 494 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 RRP12Q5JTH9 1297 aaKnown RBP6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 BROXQ5VW32 411 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 CNNM4Q6P4Q7 775 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 HOMER1Q86YM7 354 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 CD2APQ9Y5K6 639 aa6.08□□□□□ -1.44
TRAPPC13-209ENST00000508304 SETD1BQ9UPS6 1966 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 RAB11FIP3O75154 756 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 FKBP9O95302 570 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 CTGFP29279 349 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 SRSF4Q08170 494 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 TCEA2Q15560 299 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 CT83Q5H943 113 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 ZNF788Q6ZQV5 615 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 FKBP9P1Q75LS8 142 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 LNX2Q8N448 690 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 OR7D4Q8NG98 312 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 UNKLQ9H9P5 680 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 BCO1Q9HAY6 547 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 EMC7Q9NPA0 242 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 KCTD5Q9NXV2 234 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 FAM30AQ9NZY2 134 aa6.07□□□□□ -1.44
TRAPPC13-209ENST00000508304 WIPF3A6NGB9 483 aa6.06□□□□□ -1.44
TRAPPC13-209ENST00000508304 GPANK1O95872 356 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms