RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MYCT1Q8N699 235 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ETNPPLQ8TBG4 499 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMEM174Q8WUU8 243 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 INPP5DQ92835 1189 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 KIFAP3Q92845 792 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGEF2Q92974 986 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 C18orf8Q96DM3 657 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TRIM11Q96F44 468 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 STAMBPL1Q96FJ0 436 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 BORCS6Q96GS4 357 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SNF8Q96H20 258 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 MAGEB18Q96M61 343 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMEM237Q96Q45 408 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 NACC1Q96RE7 527 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 IWS1Q96ST2 819 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TUBB6Q9BUF5 446 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TRAIPQ9BWF2 469 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 C1QTNF2Q9BXJ5 285 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 FGFBP2Q9BYJ0 223 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ADAM7Q9H2U9 754 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 EPB41L4BQ9H329 900 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SEMA4AQ9H3S1 761 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 GOLPH3Q9H4A6 298 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 TMEM206Q9H813 350 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 PARVGQ9HBI0 331 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 CD209Q9NNX6 404 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 OSGEPQ9NPF4 335 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ARHGEF3Q9NR81 526 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPATS2LQ9NUQ6 558 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SENP1Q9P0U3 644 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 LGALS13Q9UHV8 139 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SERPINB13Q9UIV8 391 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 GGA1Q9UJY5 639 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP20Q9Y2K6 914 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 RTCBQ9Y3I0 505 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ALG6Q9Y672 507 aa5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 DDX60LQ5H9U9 1706 aaKnown RBP5.31□□□□□ -1.56
HMGB3P16-201ENST00000508037 ADGRA3Q8IWK6 1321 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 WTIPA6NIX2 430 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP17L10C9JJH3 530 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 OPLAHO14841 1288 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 BACH1O14867 736 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FSCN2O14926 492 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 THAP12O43422 761 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SORBS3O60504 671 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 EXOC3O60645 756 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CDH16O75309 829 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 BBOX1O75936 387 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 UFL1O94874 794 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TTC4O95801 387 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FTLP02792 175 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CYP1A2P05177 515 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RPSAP08865 295 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ABHD2P08910 425 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPATA31C1P0DKV0 1188 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MYBL1P10243 752 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CCNB1P14635 433 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 AKR1B1P15121 316 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ATF2P15336 505 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FGFR4P22455 802 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TM4SF1P30408 202 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 HOXD13P35453 343 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 GCKP35557 465 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SLC1A1P43005 524 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 IFNAR2P48551 515 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ALDH5A1P51649 535 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CASP5P51878 434 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MFAP3P55082 362 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 WDR4P57081 412 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MRPS35P82673 323 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CENPCQ03188 943 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 BFSP1Q12934 665 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 PTK6Q13882 451 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RRP1BQ14684 758 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MTFR1Q15390 333 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPRED3Q2MJR0 410 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 QRICH1Q2TAL8 776 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 MFSD14BQ5SR56 506 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 WASHC2DQ5SRD0 308 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 NUGGCQ68CJ6 796 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CAPRIN2Q6IMN6 1127 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RINT1Q6NUQ1 792 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RNF207Q6ZRF8 634 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RGS9BPQ6ZS82 235 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 BZW1Q7L1Q6 419 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ASRGL1Q7L266 308 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 APBB1IPQ7Z5R6 666 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 USP37Q86T82 979 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 TXNRD3Q86VQ6 643 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 FBXO11Q86XK2 927 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RELL1Q8IUW5 271 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 C12orf56Q8IXR9 622 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 LARGE2Q8N3Y3 721 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 PRELID2Q8N945 189 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 EPS8L3Q8TE67 593 aaKnown RBP5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 AGAP11Q8TF27 550 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 CRYGNQ8WXF5 182 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 ALG3Q92685 438 aa5.3□□□□□ -1.56
HMGB3P16-201ENST00000508037 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms