RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 AVENQ9NQS1 362 aaPredicted RBP18.25■□□□□ 0.51
SNF8-205ENST00000507302 ANKEF1Q9NU02 776 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 NCDNQ9UBB6 729 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 CACNG4Q9UBN1 327 aa18.25■□□□□ 0.51
SNF8-205ENST00000507302 SMG5Q9UPR3 1016 aaKnown RBP18.25■□□□□ 0.51
SNF8-205ENST00000507302 MAP1BP46821 2468 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 TBC1D4O60343 1298 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 XYLBO75191 536 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 ECI2O75521 394 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 KIF4AO95239 1232 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 NPTXRO95502 500 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 TARSP26639 723 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 LMNB2Q03252 620 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 CTTNQ14247 550 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 UBXN2BQ14CS0 331 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 FAM187BQ17R55 369 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 LIN9Q5TKA1 542 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 POTEHQ6S545 545 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 SKAP1Q86WV1 359 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 ATRIPQ8WXE1 791 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 YTHDC1Q96MU7 727 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 NAP1L4Q99733 375 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 KLK14Q9P0G3 267 aa18.24■□□□□ 0.51
SNF8-205ENST00000507302 DNMT3BQ9UBC3 853 aaKnown RBP18.24■□□□□ 0.51
SNF8-205ENST00000507302 USP24Q9UPU5 2620 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
SNF8-205ENST00000507302 CYP4A11Q02928 519 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 ELAVL2Q12926 359 aaKnown RBP18.23■□□□□ 0.51
SNF8-205ENST00000507302 FAM171A1Q5VUB5 890 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 CDCA2Q69YH5 1023 aaPredicted RBP18.23■□□□□ 0.51
SNF8-205ENST00000507302 CDR2LQ86X02 465 aaPredicted RBP18.23■□□□□ 0.51
SNF8-205ENST00000507302 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 SLFN12Q8IYM2 578 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 KXD1Q9BQD3 176 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 FZD8Q9H461 694 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 KCNJ14Q9UNX9 436 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 F5P12259 2224 aa18.23■□□□□ 0.51
SNF8-205ENST00000507302 CHD6Q8TD26 2715 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 CCDC194A0A1B0GVG4 234 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 TMEM189-UBE2V1I3L0A0 370 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 CCL16O15467 120 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
SNF8-205ENST00000507302 CD72P21854 359 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 FGFR3P22607 806 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 RARRES1P49788 294 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
SNF8-205ENST00000507302 NCAPH2Q6IBW4 605 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.22■□□□□ 0.51
SNF8-205ENST00000507302 SLC7A14Q8TBB6 771 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 EIF2AK1Q9BQI3 630 aaKnown RBP18.22■□□□□ 0.51
SNF8-205ENST00000507302 RTKNQ9BST9 563 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 HCFC1R1Q9NWW0 138 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 GDE1Q9NZC3 331 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 MTRRQ9UBK8 725 aa18.22■□□□□ 0.51
SNF8-205ENST00000507302 DAXXQ9UER7 740 aaPredicted RBP18.22■□□□□ 0.51
SNF8-205ENST00000507302 TRIP11Q15643 1979 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 NCAM2O15394 837 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 XRCC6P12956 609 aaKnown RBP eCLIP18.21■□□□□ 0.511e-6■■■■■ 27.1
SNF8-205ENST00000507302 RBM25P49756 843 aaKnown RBP18.21■□□□□ 0.51
SNF8-205ENST00000507302 PABPC1LQ4VXU2 614 aaKnown RBP18.21■□□□□ 0.51
SNF8-205ENST00000507302 EARS2Q5JPH6 523 aaKnown RBP18.21■□□□□ 0.51
SNF8-205ENST00000507302 TPH2Q8IWU9 490 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 DNASE1L2Q92874 299 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 PLA2G2FQ9BZM2 168 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 CXCL16Q9H2A7 254 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 PARD6AQ9NPB6 346 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 PARP2Q9UGN5 583 aa18.21■□□□□ 0.51
SNF8-205ENST00000507302 CASTOR2A6NHX0 329 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 CPLX1O14810 134 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 EPB41L2O43491 1005 aaKnown RBP18.2■□□□□ 0.5
SNF8-205ENST00000507302 THP07101 528 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 ADCY1Q08828 1119 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 CD300LGQ6UXG3 332 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 ZNF852Q6ZMS4 543 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 TPRG1Q6ZUI0 275 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 OXER1Q8TDS5 423 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 HASPINQ8TF76 798 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 SECISBP2LQ93073 1101 aaKnown RBP18.2■□□□□ 0.5
SNF8-205ENST00000507302 ELSPBP1Q96BH3 223 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 IER2Q9BTL4 223 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 PRMT7Q9NVM4 692 aaPredicted RBP18.2■□□□□ 0.5
SNF8-205ENST00000507302 BACE2Q9Y5Z0 518 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 STK36Q9NRP7 1315 aa18.2■□□□□ 0.5
SNF8-205ENST00000507302 CFAP47Q6ZTR5 3102 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 ARHGEF37A1IGU5 675 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 ADRB1P08588 477 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 FCARP24071 287 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 OR1D2P34982 312 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 MTAPQ13126 283 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 CEP57Q86XR8 500 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 TNFRSF25Q93038 417 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 TM6SF1Q9BZW5 370 aa18.19■□□□□ 0.5
SNF8-205ENST00000507302 POLR3FQ9H1D9 316 aaPredicted RBP18.19■□□□□ 0.5
SNF8-205ENST00000507302 CHRDQ9H2X0 955 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms