RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 KANK3Q6NY19 840 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 STXBP4Q6ZWJ1 553 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 SYCP3Q8IZU3 236 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 ZSWIM2Q8NEG5 633 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 MRPL38Q96DV4 380 aaKnown RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 TIGD1Q96MW7 591 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 ZMAT2Q96NC0 199 aaKnown RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 FAM193BQ96PV7 902 aaPredicted RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 PPP1R10Q96QC0 940 aaKnown RBP19.84■□□□□ 0.77
NPHP4-210ENST00000506941 TMEM175Q9BSA9 504 aa19.84■□□□□ 0.77
NPHP4-210ENST00000506941 UBE4BO95155 1302 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 UNC80Q8N2C7 3258 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 F8W810 466 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 CSPG5O95196 566 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 CLTAP09496 248 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 PPM1AP35813 382 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 YARSP54577 528 aaKnown RBP19.83■□□□□ 0.77
NPHP4-210ENST00000506941 UBE2HP62256 183 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 PLCB3Q01970 1234 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 ENOX2Q16206 610 aaKnown RBP19.83■□□□□ 0.77
NPHP4-210ENST00000506941 BMT2Q1RMZ1 405 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 SLFN12LQ6IEE8 588 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 POF1BQ8WVV4 589 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 IGSF21Q96ID5 467 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 PAAF1Q9BRP4 392 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 TMEM206Q9H813 350 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 TOPORSQ9NS56 1045 aaPredicted RBP19.83■□□□□ 0.77
NPHP4-210ENST00000506941 LMCD1Q9NZU5 365 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 CNTN3Q9P232 1028 aa19.83■□□□□ 0.77
NPHP4-210ENST00000506941 AGO2Q9UKV8 859 aaKnown RBP19.83■□□□□ 0.77
NPHP4-210ENST00000506941 SPTBN5Q9NRC6 3674 aaKnown RBP19.82■□□□□ 0.76
NPHP4-210ENST00000506941 SCN1AP35498 2009 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 SMIM28A0A1B0GU29 152 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 NRP1O14786 923 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 RHOBTB3O94955 611 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 THP07101 528 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 ACOT2P49753 483 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 PSMD2Q13200 908 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 NELFCDQ8IXH7 590 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 MICALL1Q8N3F8 863 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 MAFAQ8NHW3 353 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-210ENST00000506941 POMGNT1Q8WZA1 660 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 RABGGTAQ92696 567 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 ERCC4Q92889 916 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-210ENST00000506941 CBWD1Q9BRT8 395 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 VN1R3Q9BXE9 311 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 LMAN2LQ9H0V9 348 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 MARCH5Q9NX47 278 aa19.82■□□□□ 0.76
NPHP4-210ENST00000506941 CPSF3Q9UKF6 684 aaKnown RBP19.82■□□□□ 0.76
NPHP4-210ENST00000506941 PRG3Q9Y2Y8 225 aaPredicted RBP19.82■□□□□ 0.76
NPHP4-210ENST00000506941 TTC26A0AVF1 554 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 TGFB1I1O43294 461 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 KCNE1P15382 129 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 IRS1P35568 1242 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 OR1G1P47890 313 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 SOX4Q06945 474 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-210ENST00000506941 TUSC3Q13454 348 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 PTPROQ16827 1216 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 CRELD2Q6UXH1 353 aaPredicted RBP19.81■□□□□ 0.76
NPHP4-210ENST00000506941 LZTS1Q9Y250 596 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 FAN1Q9Y2M0 1017 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 PCDHGC5Q9Y5F6 944 aa19.81■□□□□ 0.76
NPHP4-210ENST00000506941 CASTOR2A6NHX0 329 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 KINO60870 393 aaKnown RBP19.8■□□□□ 0.76
NPHP4-210ENST00000506941 SLC34A2O95436 690 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 ALDH2P05091 517 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 ADRB2P07550 413 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 GARTP22102 1010 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 ERVFC1P60507 584 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 UBE3AQ05086 875 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 KCNB1Q14721 858 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 CCDC85BQ15834 202 aaPredicted RBP19.8■□□□□ 0.76
NPHP4-210ENST00000506941 KYAT1Q16773 422 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 TMEM130Q8N3G9 435 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 C18orf25Q96B23 403 aaPredicted RBP19.8■□□□□ 0.76
NPHP4-210ENST00000506941 SAAL1Q96ER3 474 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 TMEM169Q96HH4 297 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 CCDC34Q96HJ3 373 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 PCIF1Q9H4Z3 704 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 GOLGA2P5Q9HBQ8 144 aa19.8■□□□□ 0.76
NPHP4-210ENST00000506941 PLXNA3P51805 1871 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 LACTBL1A8MY62 500 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 SPAG1Q07617 926 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 ARMCX5Q6P1M9 558 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 SPATA20Q8TB22 786 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 PPM1EQ8WY54 764 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 RPF1Q9H9Y2 349 aaKnown RBP19.79■□□□□ 0.76
NPHP4-210ENST00000506941 PLEKHA5Q9HAU0 1116 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 TLR9Q9NR96 1032 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 AGPAT3Q9NRZ7 376 aa19.79■□□□□ 0.76
NPHP4-210ENST00000506941 CARNS1A5YM72 827 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 GOLGA8IPA6NC78 632 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 GOLGA8JA6NMD2 632 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 FSCN2O14926 492 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 EFEMP2O95967 443 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 IGFBP6P24592 240 aaPredicted RBP19.78■□□□□ 0.76
NPHP4-210ENST00000506941 WNT7BP56706 349 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 KRT17Q04695 432 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 PPP2R3AQ06190 1150 aa19.78■□□□□ 0.76
NPHP4-210ENST00000506941 KNOP1Q1ED39 458 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms