RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 LRRC63Q05C16 580 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 BTG3Q14201 252 aaPredicted RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 NAB2Q15742 525 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 DPCR1Q3MIW9 517 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 PAN2Q504Q3 1202 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 CD302Q8IX05 232 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 XXYLT1Q8NBI6 393 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 CLP1Q92989 425 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 MED15Q96RN5 788 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 MRPL9Q9BYD2 267 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 RPF1Q9H9Y2 349 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 MSRAQ9UJ68 235 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 PLAGL2Q9UPG8 496 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 INPP5FQ9Y2H2 1132 aa13.98□□□□□ -0.17
TCOF1-210ENST00000506767 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
TCOF1-210ENST00000506767 KIAA1671Q9BY89 1806 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 SMIM28A0A1B0GU29 152 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 LINC01553A4QN01 128 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 TRIM49BA6NDI0 452 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 LACTBL1A8MY62 500 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 LETM1O95202 739 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 POMCP01189 267 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 CA3P07451 260 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 DNAJB2P25686 324 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 SCNN1GP51170 649 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 CYP2J2P51589 502 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 MCCD1P59942 119 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 DSC1Q08554 894 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 GRIK3Q13003 919 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 PAK1Q13153 545 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 CT47A1Q5JQC4 288 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 TTI2Q6NXR4 508 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 SASS6Q6UVJ0 657 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 Q7L0L9 218 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 ZNF280BQ86YH2 543 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 CBWD2Q8IUF1 395 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 BRSK2Q8IWQ3 736 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 LRRC43Q8N309 656 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 FIBCD1Q8N539 461 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 URGCPQ8TCY9 931 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 ZMAT2Q96NC0 199 aaKnown RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 TSPAN18Q96SJ8 248 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 DUSP9Q99956 384 aaKnown RBP13.97□□□□□ -0.17
TCOF1-210ENST00000506767 NKX2-4Q9H2Z4 354 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 ASB7Q9H672 318 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
TCOF1-210ENST00000506767 BICDL2A1A5D9 508 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 ZNF233A6NK53 670 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 MAPK13O15264 365 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 B4GALT3O60512 393 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 EXOC3O60645 756 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 DDHD2O94830 711 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 THP07101 528 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 NR2F2P24468 414 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 RPL13P26373 211 aaKnown RBP13.96□□□□□ -0.17
TCOF1-210ENST00000506767 CASP4P49662 377 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 WNT7BP56706 349 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 FKBP3Q00688 224 aaKnown RBP13.96□□□□□ -0.17
TCOF1-210ENST00000506767 TAP1Q03518 808 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 ADAM9Q13443 819 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-210ENST00000506767 ZBTB6Q15916 424 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 SNRNP35Q16560 246 aaKnown RBP13.96□□□□□ -0.17
TCOF1-210ENST00000506767 KLHL10Q6JEL2 608 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 DEFB123Q8N688 67 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 RDH13Q8NBN7 331 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 MFSD14AQ96MC6 490 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 RPS6KC1Q96S38 1066 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 TSG101Q99816 390 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 FUCA2Q9BTY2 467 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 NRDE2Q9H7Z3 1164 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 RBAKQ9NYW8 714 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-210ENST00000506767 RWDD2AQ9UIY3 292 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 CTNND2Q9UQB3 1225 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 DERAQ9Y315 318 aa13.96□□□□□ -0.17
TCOF1-210ENST00000506767 LAMA3Q16787 3333 aa13.96□□□□□ -0.18
TCOF1-210ENST00000506767 NLRC5Q86WI3 1866 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 AKAP3O75969 853 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 IL18RAPO95256 599 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 ERCC5P28715 1186 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-210ENST00000506767 CYP24A1Q07973 514 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 STX1AQ16623 288 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 ANO10Q9NW15 660 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 DACH1Q9UI36 760 aa13.95□□□□□ -0.18
TCOF1-210ENST00000506767 C5orf67F2Z3F1 127 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 CETN3O15182 167 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 LAG3P18627 525 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 STX17P56962 302 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 ERVK-21P61565 698 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 RNASELQ05823 741 aaKnown RBP13.94□□□□□ -0.18
TCOF1-210ENST00000506767 TYRO3Q06418 890 aa13.94□□□□□ -0.18
TCOF1-210ENST00000506767 SOX4Q06945 474 aaPredicted RBP13.94□□□□□ -0.18
TCOF1-210ENST00000506767 TUSC3Q13454 348 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms