RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 DTWD2Q8NBA8 298 aa16.05■□□□□ 0.16
SEC24D-208ENST00000506622 NKD2Q969F2 451 aaPredicted RBP16.05■□□□□ 0.16
SEC24D-208ENST00000506622 CLSTN3Q9BQT9 956 aa16.05■□□□□ 0.16
SEC24D-208ENST00000506622 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
SEC24D-208ENST00000506622 USP20Q9Y2K6 914 aa16.05■□□□□ 0.16
SEC24D-208ENST00000506622 GDAQ9Y2T3 454 aa16.05■□□□□ 0.16
SEC24D-208ENST00000506622 ZFP37Q9Y6Q3 630 aaPredicted RBP16.05■□□□□ 0.16
SEC24D-208ENST00000506622 PRR23AA6NEV1 266 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 HNRNPA1P09651 372 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC24D-208ENST00000506622 FSHRP23945 695 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 CCT6AP40227 531 aaKnown RBP16.04■□□□□ 0.16
SEC24D-208ENST00000506622 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 DCAF4L1Q3SXM0 396 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 TTC38Q5R3I4 469 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 PPM1LQ5SGD2 360 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 APBB1IPQ7Z5R6 666 aaPredicted RBP16.04■□□□□ 0.16
SEC24D-208ENST00000506622 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
SEC24D-208ENST00000506622 KIFAP3Q92845 792 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 FBXW11Q9UKB1 542 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 CA14Q9ULX7 337 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 NOL7Q9UMY1 257 aaKnown RBP16.04■□□□□ 0.16
SEC24D-208ENST00000506622 VWA8A3KMH1 1905 aa16.04■□□□□ 0.16
SEC24D-208ENST00000506622 KRBA1A5PL33 1030 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 TRAPPC10P48553 1259 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 NAB2Q15742 525 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 EEF1DP3Q658K8 133 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 GRASPQ7Z6J2 395 aaPredicted RBP16.03■□□□□ 0.16
SEC24D-208ENST00000506622 FAM184AQ8NB25 1140 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 FBXO18Q8NFZ0 1043 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 GPR152Q8TDT2 470 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 CXCL16Q9H2A7 254 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 BHMT2Q9H2M3 363 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 POLD4Q9HCU8 107 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 POLIQ9UNA4 740 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 STK24Q9Y6E0 443 aa16.03■□□□□ 0.16
SEC24D-208ENST00000506622 ANHXE9PGG2 379 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 K7ERI5 159 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 XYLBO75191 536 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 B3GAT3O94766 335 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 C8AP07357 584 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.169e-9■■□□□ 12.5
SEC24D-208ENST00000506622 HMGN5P82970 282 aaKnown RBP16.02■□□□□ 0.16
SEC24D-208ENST00000506622 HTR4Q13639 388 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 ATF7IP2Q5U623 682 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 DCLRE1AQ6PJP8 1040 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.02■□□□□ 0.16
SEC24D-208ENST00000506622 KIFC3Q9BVG8 833 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 RAB34Q9BZG1 259 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 TBC1D17Q9HA65 648 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
SEC24D-208ENST00000506622 CACNA1IQ9P0X4 2223 aa16.02■□□□□ 0.15
SEC24D-208ENST00000506622 CCL16O15467 120 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 TRAPPC3O43617 180 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 SEC24BO95487 1268 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 EDN1P05305 212 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 HOXA9P31269 272 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 OR1D2P34982 312 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 PDIA5Q14554 519 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 ECM1Q16610 540 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 UVSSAQ2YD98 709 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 GLRA4Q5JXX5 417 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 NT5DC1Q5TFE4 455 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 ERICH6BQ5W0A0 696 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 ZSCAN31Q96LW9 406 aaPredicted RBP16.01■□□□□ 0.15
SEC24D-208ENST00000506622 UROC1Q96N76 676 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 SLC2A4RGQ9NR83 387 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 DDX19AQ9NUU7 478 aaKnown RBP16.01■□□□□ 0.15
SEC24D-208ENST00000506622 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 MYH15Q9Y2K3 1946 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 DCHS1Q96JQ0 3298 aa16.01■□□□□ 0.15
SEC24D-208ENST00000506622 CCDC169A6NNP5 214 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 TMEM189-UBE2V1I3L0A0 370 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 ADAM12O43184 909 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 FGFR3P22607 806 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 CLCNKBP51801 687 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 YARSP54577 528 aaKnown RBP16■□□□□ 0.15
SEC24D-208ENST00000506622 RAB33AQ14088 237 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 AXDND1Q5T1B0 1012 aaPredicted RBP16■□□□□ 0.15
SEC24D-208ENST00000506622 PHLDB3Q6NSJ2 640 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 ST13P5Q8NFI4 369 aaPredicted RBP16■□□□□ 0.15
SEC24D-208ENST00000506622 SLC7A14Q8TBB6 771 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 SNX29Q8TEQ0 813 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 PPP1R10Q96QC0 940 aaKnown RBP16■□□□□ 0.15
SEC24D-208ENST00000506622 ARHGEF3Q9NR81 526 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 TOPORSQ9NS56 1045 aaPredicted RBP16■□□□□ 0.15
SEC24D-208ENST00000506622 DNM3Q9UQ16 869 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 TNFSF13BQ9Y275 285 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 SIT1Q9Y3P8 196 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 CITO14578 2027 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 DMXL1Q9Y485 3027 aa16■□□□□ 0.15
SEC24D-208ENST00000506622 NTHL1P78549 312 aa15.99■□□□□ 0.15
SEC24D-208ENST00000506622 PTGDRQ13258 359 aa15.99■□□□□ 0.15
SEC24D-208ENST00000506622 NBR1Q14596 966 aa15.99■□□□□ 0.15
SEC24D-208ENST00000506622 SPECC1Q5M775 1068 aa15.99■□□□□ 0.15
SEC24D-208ENST00000506622 PARM1Q6UWI2 310 aa15.99■□□□□ 0.15
SEC24D-208ENST00000506622 MTSS1LQ765P7 747 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms