RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SH2D3CQ8N5H7 860 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 OR2C3Q8N628 320 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 LINC00482Q8N8I6 264 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 PIK3C3Q8NEB9 887 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 OR7D4Q8NG98 312 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 IL31RAQ8NI17 732 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 CCHCR1Q8TD31 782 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 MZB1Q8WU39 189 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 POF1BQ8WVV4 589 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 ANKS1AQ92625 1134 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 EVI5LQ96CN4 794 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TMX3Q96JJ7 454 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 VPS11Q9H270 941 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 WDCPQ9H6R7 721 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 C14orf93Q9H972 538 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZNF287Q9HBT7 754 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 STARD7Q9NQZ5 370 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TMEM140Q9NV12 185 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 ABCF2Q9UG63 623 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 STAP2Q9UGK3 403 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 FEZ2Q9UHY8 353 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 MBD1Q9UIS9 605 aaPredicted RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 OGDHLQ9ULD0 1010 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 PADI4Q9UM07 663 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 CORO2BQ9UQ03 480 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 SIK3Q9Y2K2 1263 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 NUP160Q12769 1436 aa3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 WRNQ14191 1432 aaPredicted RBP eCLIP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 MYBBP1AQ9BQG0 1328 aaKnown RBP3.93□□□□□ -1.78
TRAPPC11-205ENST00000506426 TEX51A0A1B0GUA7 166 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 DDX3XO00571 662 aaKnown RBP eCLIP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TBX3O15119 743 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SH3BP5O60239 455 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 EIF5BO60841 1220 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 ALDH1A2O94788 518 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 FGAP02671 866 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 HMGCRP04035 888 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TYRP1P17643 537 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 MALP21145 153 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TNFSF4P23510 183 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 IGFBP6P24592 240 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SLC7A1P30825 629 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 CRHR1P34998 444 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 IL13P35225 146 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SREBF1P36956 1147 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 STT3AP46977 705 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 MEOX1P50221 254 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 MLLT6P55198 1093 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 FMO1Q01740 532 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TLE1Q04724 770 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZNF543Q08ER8 600 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TOP3AQ13472 1001 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SNAPC2Q13487 334 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 CNGA2Q16280 664 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 PDCD2Q16342 344 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 FAM209BQ5JX69 171 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TRIM68Q6AZZ1 485 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SAPCD2Q86UD0 394 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 CPXCR1Q8N123 301 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 PLA2G15Q8NCC3 412 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 IFI44Q8TCB0 444 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 BRIX1Q8TDN6 353 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 LPPQ93052 612 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 RAB24Q969Q5 203 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZBTB8AQ96BR9 441 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SUCLG2Q96I99 432 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SCLT1Q96NL6 688 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 NOX5Q96PH1 765 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 PDCD2LQ9BRP1 358 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 CRB3Q9BUF7 120 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 UNKQ9C0B0 810 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 WDR12Q9GZL7 423 aaKnown RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 SENP6Q9GZR1 1112 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 EPB41L4BQ9H329 900 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 TLR9Q9NR96 1032 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 LANCL2Q9NS86 450 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 GPRC5DQ9NZD1 345 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 CPA4Q9UI42 421 aa3.92□□□□□ -1.78
TRAPPC11-205ENST00000506426 MYOCOSA0A1B0GUC4 107 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 FHAD1B1AJZ9 1412 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 MYO1FO00160 1098 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 NBNO60934 754 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 GPR32O75388 356 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 AMY1AP04745 511 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 KITP10721 976 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 COL6A1P12109 1028 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 IL2RBP14784 551 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 BRAFP15056 766 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 GYPEP15421 78 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 DDCP20711 480 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 PPM1AP35813 382 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 ETV4P43268 484 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 KIR2DL3P43628 341 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 TNFAIP2Q03169 654 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 SMAD4Q13485 552 aaKnown RBP3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 TRIM14Q14142 442 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 FLYWCH1Q4VC44 716 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 KHDC1LQ5JSQ8 128 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 CLEC14AQ86T13 490 aa3.91□□□□□ -1.78
TRAPPC11-205ENST00000506426 ZNF354CQ86Y25 554 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms