RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 KCNG4Q8TDN1 519 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 DDX12PQ92771 950 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 ACAP3Q96P50 834 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 PRKAG3Q9UGI9 489 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 TBX20Q9UMR3 447 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 SSX2IPQ9Y2D8 614 aa17.01■□□□□ 0.31
MED28-204ENST00000506409 MYMKA6NI61 221 aa17■□□□□ 0.31
MED28-204ENST00000506409 CUTAO60888 179 aa17■□□□□ 0.31
MED28-204ENST00000506409 HOXB8P17481 243 aaPredicted RBP17■□□□□ 0.31
MED28-204ENST00000506409 NMT1P30419 496 aaKnown RBP17■□□□□ 0.31
MED28-204ENST00000506409 SSTR3P32745 418 aaPredicted RBP17■□□□□ 0.31
MED28-204ENST00000506409 ABCD1P33897 745 aa17■□□□□ 0.31
MED28-204ENST00000506409 MCL1Q07820 350 aa17■□□□□ 0.31
MED28-204ENST00000506409 PPFIBP1Q86W92 1011 aa17■□□□□ 0.31
MED28-204ENST00000506409 GJD3Q8N144 294 aa17■□□□□ 0.31
MED28-204ENST00000506409 SNX27Q96L92 541 aa17■□□□□ 0.31
MED28-204ENST00000506409 PPP1R10Q96QC0 940 aaKnown RBP17■□□□□ 0.31
MED28-204ENST00000506409 FIZ1Q96SL8 496 aa17■□□□□ 0.31
MED28-204ENST00000506409 GPR62Q9BZJ7 368 aa17■□□□□ 0.31
MED28-204ENST00000506409 CFAP45Q9UL16 551 aa17■□□□□ 0.31
MED28-204ENST00000506409 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
MED28-204ENST00000506409 SF3B1O75533 1304 aaKnown RBP eCLIP16.99■□□□□ 0.318e-9■■■■■ 155.1
MED28-204ENST00000506409 BDP1A6H8Y1 2624 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 SMIM28A0A1B0GU29 152 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 LILRB3O75022 631 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 KIF4AO95239 1232 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 CNPP09543 421 aaKnown RBP16.99■□□□□ 0.31
MED28-204ENST00000506409 KLRC2P26717 231 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 ME1P48163 572 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 GTF2BQ00403 316 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 DNM1Q05193 864 aaKnown RBP16.99■□□□□ 0.31
MED28-204ENST00000506409 ZP2Q05996 745 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 USP41Q3LFD5 358 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 SEZ6Q53EL9 994 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 SYCE2Q6PIF2 218 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 ALKAL1Q6UXT8 129 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 SFR1Q86XK3 245 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 ADHFE1Q8IWW8 467 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 HASPINQ8TF76 798 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 KLHL5Q96PQ7 755 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 APOL5Q9BWW9 433 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 CHST7Q9NS84 486 aa16.99■□□□□ 0.31
MED28-204ENST00000506409 PIGRP01833 764 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 IDEP14735 1019 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 EPCAMP16422 314 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 GAP43P17677 238 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 DSG1Q02413 1049 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 ZC2HC1CQ53FD0 456 aaPredicted RBP16.98■□□□□ 0.31
MED28-204ENST00000506409 XKR4Q5GH76 650 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 AXDND1Q5T1B0 1012 aaPredicted RBP16.98■□□□□ 0.31
MED28-204ENST00000506409 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 SHC4Q6S5L8 630 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 SLC22A17Q8WUG5 538 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 UROC1Q96N76 676 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 POP1Q99575 1024 aaKnown RBP16.98■□□□□ 0.31
MED28-204ENST00000506409 HAPLN2Q9GZV7 340 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 ST6GALNAC4Q9H4F1 302 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 CD320Q9NPF0 282 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 SLC38A7Q9NVC3 462 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 CNTN3Q9P232 1028 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 SEL1LQ9UBV2 794 aa16.98■□□□□ 0.31
MED28-204ENST00000506409 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 B3GAT3O94766 335 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 ADH1AP07327 375 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 KCNE1P15382 129 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 CLCNKBP51801 687 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 BECN1Q14457 450 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 RIN2Q8WYP3 895 aaPredicted RBP16.97■□□□□ 0.31
MED28-204ENST00000506409 DHX58Q96C10 678 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 ZMAT2Q96NC0 199 aaKnown RBP16.97■□□□□ 0.31
MED28-204ENST00000506409 S1PR5Q9H228 398 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 CUEDC2Q9H467 287 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 MRPL44Q9H9J2 332 aaKnown RBP16.97■□□□□ 0.31
MED28-204ENST00000506409 GOLGA2P5Q9HBQ8 144 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 DZANK1Q9NVP4 752 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 PCDHA7Q9UN72 937 aa16.97■□□□□ 0.31
MED28-204ENST00000506409 C5orf42Q9H799 3197 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 CITO14578 2027 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 TMEM189-UBE2V1I3L0A0 370 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 TEX28O15482 410 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
MED28-204ENST00000506409 CLTAP09496 248 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 CXCL8P10145 99 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 CLCN4P51793 760 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 SOX4Q06945 474 aaPredicted RBP16.96■□□□□ 0.31
MED28-204ENST00000506409 ELAVL2Q12926 359 aaKnown RBP16.96■□□□□ 0.31
MED28-204ENST00000506409 E2F4Q16254 413 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 KYAT1Q16773 422 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 UPP1Q16831 310 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 FAM171A1Q5VUB5 890 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 CES5AQ6NT32 575 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 DCLRE1AQ6PJP8 1040 aa16.96■□□□□ 0.31
MED28-204ENST00000506409 ZNF720Q7Z2F6 126 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms