RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 MAPK6Q16659 721 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PTPRNQ16849 979 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SLC35G1Q2M3R5 365 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 LONRF3Q496Y0 759 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM196Q5HYL7 178 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PRSS55Q6UWB4 352 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 RASSF3Q86WH2 238 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 RALGPS2Q86X27 583 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SYT12Q8IV01 421 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 MFSD6LQ8IWD5 586 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 COLGALT2Q8IYK4 626 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 ADGRF4Q8IZF3 695 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 HDDC3Q8N4P3 179 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 FRMD1Q8N878 549 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 EXD3Q8N9H8 876 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 OLIG1Q8TAK6 271 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SLC7A14Q8TBB6 771 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 DEPDC1BQ8WUY9 529 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 TSC1Q92574 1164 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 MTMR8Q96EF0 704 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PHF12Q96QT6 1004 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 ARID3AQ99856 593 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 CLSTN3Q9BQT9 956 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 GBP3Q9H0R5 595 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 C8orf33Q9H7E9 229 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF287Q9HBT7 754 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 CPNE5Q9HCH3 593 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 STARD5Q9NSY2 213 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SMC4Q9NTJ3 1288 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SNTG2Q9NY99 539 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 GTSE1Q9NYZ3 720 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 RTEL1Q9NZ71 1219 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SEPT9Q9UHD8 586 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SLC8A2Q9UPR5 921 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SSX2IPQ9Y2D8 614 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 INPP5FQ9Y2H2 1132 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 FAN1Q9Y2M0 1017 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 MRPL11Q9Y3B7 192 aaKnown RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 MRPS23Q9Y3D9 190 aaKnown RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 SALL2Q9Y467 1007 aaPredicted RBP3.85□□□□□ -1.79
TCOF1-208ENST00000506063 OBSL1O75147 1896 aa3.85□□□□□ -1.79
TCOF1-208ENST00000506063 NIPBLQ6KC79 2804 aaeCLIP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 DOCK9Q9BZ29 2069 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 IGKV6D-21A0A0A0MT36 114 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ANTXRLA6NF34 631 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 OTOL1A6NHN0 477 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 TSPY2A6NKD2 308 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 HEPACAM2A8MVW5 462 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 M0R2C6 588 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF263O14978 683 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 CHADO15335 359 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 RNF40O75150 1001 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 STAM2O75886 525 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 APBB3O95704 486 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 GNAI2P04899 355 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ALDH2P05091 517 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 SERPINF2P08697 491 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 CHRM1P11229 460 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 HLA-EP13747 358 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 DARSP14868 501 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ZSCAN20P17040 1043 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ITGB5P18084 799 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ATP4AP20648 1035 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ITPKAP23677 461 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 HOXD12P35452 270 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 CACNB1Q02641 598 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 RTP5Q14D33 572 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ALDH1L2Q3SY69 923 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 GNPTABQ3T906 1256 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 RRP12Q5JTH9 1297 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PPP4R3BQ5MIZ7 849 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 RTP2Q5QGT7 225 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PPM1LQ5SGD2 360 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ARHGAP40Q5TG30 622 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 NAIF1Q69YI7 327 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 GLB1LQ6UWU2 654 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 DBX2Q6ZNG2 339 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 LRRC69Q6ZNQ3 347 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 SYT13Q7L8C5 426 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PLPPR4Q7Z2D5 763 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 IFNL3Q8IZI9 196 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 GALNT15Q8N3T1 639 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 SMARCD2Q92925 531 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 ZFYVE19Q96K21 471 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 GTPBP2Q9BX10 602 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 TPSD1Q9BZJ3 242 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 JMJD4Q9H9V9 463 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 FBRSL1Q9HCM7 1045 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 MAP3K20Q9NYL2 800 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PLEKHB1Q9UF11 243 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 NOB1Q9ULX3 412 aaKnown RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 SLC6A14Q9UN76 642 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 POLIQ9UNA4 740 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 TNNQ9UQP3 1299 aa3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PRG3Q9Y2Y8 225 aaPredicted RBP3.84□□□□□ -1.79
TCOF1-208ENST00000506063 PCSK5Q92824 1860 aa3.84□□□□□ -1.8
TCOF1-208ENST00000506063 MYOFQ9NZM1 2061 aa3.83□□□□□ -1.8
TCOF1-208ENST00000506063 KIF26BQ2KJY2 2108 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms