RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 IL2RBP14784 551 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 EDNRBP24530 442 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 SP140Q13342 867 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 IL10RAQ13651 578 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 C3orf36Q3SXR2 165 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 FAM47AQ5JRC9 791 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 MFSD14BQ5SR56 506 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 PPP4R3AQ6IN85 833 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 ZNF572Q7Z3I7 529 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-205ENST00000505998 GSPT2Q8IYD1 628 aaKnown RBP7.36□□□□□ -1.23
NIPBL-205ENST00000505998 MB21D1Q8N884 522 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 STON2Q8WXE9 905 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 EDAQ92838 391 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 CEP95Q96GE4 821 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 CPPED1Q9BRF8 314 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-205ENST00000505998 TDP1Q9NUW8 608 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 MOCS1Q9NZB8 636 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 KLHL42Q9P2K6 505 aa7.36□□□□□ -1.23
NIPBL-205ENST00000505998 PNMA8BQ9ULN7 279 aaPredicted RBP7.36□□□□□ -1.23
NIPBL-205ENST00000505998 CEP162Q5TB80 1403 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 B5MCH6 92 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 DTNBO60941 627 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 GPR32O75388 356 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 RPLP2P05387 115 aaKnown RBP7.35□□□□□ -1.23
NIPBL-205ENST00000505998 AKAP5P24588 427 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 HIBADHP31937 336 aaKnown RBP7.35□□□□□ -1.23
NIPBL-205ENST00000505998 GUCY1A2P33402 732 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 PTH1RQ03431 593 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 EFEMP1Q12805 493 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 PPP2R5AQ15172 486 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 NFE2Q16621 373 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-205ENST00000505998 SPATS1Q496A3 300 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 RRP12Q5JTH9 1297 aaKnown RBP7.35□□□□□ -1.23
NIPBL-205ENST00000505998 SPTY2D1Q68D10 685 aaPredicted RBP7.35□□□□□ -1.23
NIPBL-205ENST00000505998 DOK3Q7L591 496 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 RSPH3Q86UC2 560 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 XYLT1Q86Y38 959 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 MDGA1Q8NFP4 955 aa7.35□□□□□ -1.23
NIPBL-205ENST00000505998 RAPGEF6Q8TEU7 1601 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 ADCY10Q96PN6 1610 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 ABCC2Q92887 1545 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 PRR5-ARHGAP8B1AHC4 643 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 MUSKO15146 869 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 RFPL1O75677 317 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 POU2F2P09086 479 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 RAP2AP10114 183 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 ALOX15P16050 662 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 PDCP20941 246 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 CDC42EP1Q00587 391 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 PRKD1Q15139 912 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 ATXN2LQ8WWM7 1075 aaKnown RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 CASKIN2Q8WXE0 1202 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 KAT5Q92993 513 aa7.34□□□□□ -1.23
NIPBL-205ENST00000505998 DVL3Q92997 716 aaPredicted RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 CDK5RAP1Q96SZ6 601 aaKnown RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 LSM14BQ9BX40 385 aaKnown RBP7.34□□□□□ -1.23
NIPBL-205ENST00000505998 MYBBP1AQ9BQG0 1328 aaKnown RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CFAP43Q8NDM7 1665 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 TEX33O43247 280 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 SGTAO43765 313 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 DDCP20711 480 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CYP2C19P33261 490 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 ADAM17P78536 824 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 AFMIDQ63HM1 303 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 USP45Q70EL2 814 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 PRRT2Q7Z6L0 340 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CATIPQ7Z7H3 387 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 PALM2Q8IXS6 379 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CHPFQ8IZ52 775 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 FAM9AQ8IZU1 332 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 ZGPATQ8N5A5 531 aaKnown RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 RAB24Q969Q5 203 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 TMX3Q96JJ7 454 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 KCNH6Q9H252 994 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 SPON1Q9HCB6 807 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CLCA2Q9UQC9 943 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 ACTL7AQ9Y615 435 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CFAP20Q9Y6A4 193 aaKnown RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 CLIP1P30622 1438 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 PCF11O94913 1555 aaKnown RBP7.33□□□□□ -1.24
NIPBL-205ENST00000505998 ATRNL1Q5VV63 1379 aa7.33□□□□□ -1.24
NIPBL-205ENST00000505998 HECW1Q76N89 1606 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 TBKBP1A7MCY6 615 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 PJA2O43164 708 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 SCGB1D2O95969 90 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 AMY1AP04745 511 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 SNRPA1P09661 255 aaKnown RBP7.32□□□□□ -1.24
NIPBL-205ENST00000505998 ZNF20P17024 532 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 HK1P19367 917 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 FPR1P21462 350 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 PCSK1P29120 753 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 CRHR2Q13324 411 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 LRRC41Q15345 812 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 IFIT1BQ5T764 474 aaKnown RBP7.32□□□□□ -1.24
NIPBL-205ENST00000505998 ANKS6Q68DC2 871 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 TTC7BQ86TV6 843 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 TPH2Q8IWU9 490 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 DRC7Q8IY82 874 aa7.32□□□□□ -1.24
NIPBL-205ENST00000505998 KRTAP9-9Q9BYP9 154 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms