RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 GRASPQ7Z6J2 395 aaPredicted RBP12.54□□□□□ -0.4
SIL1-208ENST00000505945 CCDC105Q8IYK2 499 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 GPR152Q8TDT2 470 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 PIK3R5Q8WYR1 880 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 FOXP1Q9H334 677 aaPredicted RBP12.54□□□□□ -0.4
SIL1-208ENST00000505945 FBXW11Q9UKB1 542 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 DMDP11532 3685 aa12.54□□□□□ -0.4
SIL1-208ENST00000505945 GVINP1Q7Z2Y8 2422 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 RFX1P22670 979 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 FSHRP23945 695 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 CCT6AP40227 531 aaKnown RBP12.53□□□□□ -0.4
SIL1-208ENST00000505945 HTR4Q13639 388 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 NBR1Q14596 966 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 PPP2R5AQ15172 486 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 GLRA4Q5JXX5 417 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 C4orf32Q8N8J7 132 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 FBXO18Q8NFZ0 1043 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
SIL1-208ENST00000505945 IFT74Q96LB3 600 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 LLPHQ9BRT6 129 aaKnown RBP12.53□□□□□ -0.4
SIL1-208ENST00000505945 RPP25Q9BUL9 199 aaKnown RBP12.53□□□□□ -0.4
SIL1-208ENST00000505945 BHMT2Q9H2M3 363 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 KIAA1024Q9UPX6 916 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 NUMBLQ9Y6R0 609 aa12.53□□□□□ -0.4
SIL1-208ENST00000505945 EP300Q09472 2414 aaPredicted RBP12.52□□□□□ -0.4
SIL1-208ENST00000505945 CCL16O15467 120 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 B3GAT3O94766 335 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 C8AP07357 584 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 OR1D2P34982 312 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 RBM25P49756 843 aaKnown RBP12.52□□□□□ -0.41
SIL1-208ENST00000505945 EFNA5P52803 228 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 ELAVL2Q12926 359 aaKnown RBP12.52□□□□□ -0.41
SIL1-208ENST00000505945 ORC2Q13416 577 aaPredicted RBP12.52□□□□□ -0.41
SIL1-208ENST00000505945 GNL2Q13823 731 aaKnown RBP12.52□□□□□ -0.41
SIL1-208ENST00000505945 PPM1LQ5SGD2 360 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 NT5DC1Q5TFE4 455 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 LIN9Q5TKA1 542 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 ATF7IP2Q5U623 682 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 LRWD1Q9UFC0 647 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 POLIQ9UNA4 740 aa12.52□□□□□ -0.41
SIL1-208ENST00000505945 K7ERI5 159 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
SIL1-208ENST00000505945 MUTP22033 750 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
SIL1-208ENST00000505945 CLCNKBP51801 687 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 GPC5P78333 572 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 RAB33AQ14088 237 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 DCAF4L1Q3SXM0 396 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 AXDND1Q5T1B0 1012 aaPredicted RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 DCLRE1AQ6PJP8 1040 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 PARM1Q6UWI2 310 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 RSPO2Q6UXX9 243 aaPredicted RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 CEP120Q8N960 986 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 FAM184AQ8NB25 1140 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 ITFG1Q8TB96 612 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 SLC7A14Q8TBB6 771 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 KIFAP3Q92845 792 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 FGF13Q92913 245 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 FGF14Q92915 247 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 PPP1R10Q96QC0 940 aaKnown RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 GOLGA2P5Q9HBQ8 144 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 DDX19AQ9NUU7 478 aaKnown RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 CDH7Q9ULB5 785 aa12.51□□□□□ -0.41
SIL1-208ENST00000505945 ZFP37Q9Y6Q3 630 aaPredicted RBP12.51□□□□□ -0.41
SIL1-208ENST00000505945 VWA8A3KMH1 1905 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 CCDC169A6NNP5 214 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 I3L4J1 428 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 FGFR3P22607 806 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 TRAPPC10P48553 1259 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 TOB1P50616 345 aaPredicted RBP12.5□□□□□ -0.41
SIL1-208ENST00000505945 PEX3P56589 373 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 OSTNP61366 133 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 PTGDRQ13258 359 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 PDIA5Q14554 519 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 UPP1Q16831 310 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 PHLDB3Q6NSJ2 640 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 PDXDC1Q6P996 788 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 CD300LGQ6UXG3 332 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 ADSSL1Q8N142 457 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 SNX29Q8TEQ0 813 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 SLC2A4RGQ9NR83 387 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 HCFC1R1Q9NWW0 138 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 MTRRQ9UBK8 725 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 NOL7Q9UMY1 257 aaKnown RBP12.5□□□□□ -0.41
SIL1-208ENST00000505945 TNFSF13BQ9Y275 285 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 SIT1Q9Y3P8 196 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 PCDHB6Q9Y5E3 794 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 CDY1Q9Y6F8 540 aa12.5□□□□□ -0.41
SIL1-208ENST00000505945 SMIM28A0A1B0GU29 152 aa12.49□□□□□ -0.41
SIL1-208ENST00000505945 PP2D1A8MPX8 630 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms