RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 MLLT6P55198 1093 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-210ENST00000505589 CCT2P78371 535 aaKnown RBP10.97□□□□□ -0.65
NEDD9-210ENST00000505589 INF2Q27J81 1249 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 LAIR1Q6GTX8 287 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 POTEGQ6S5H5 508 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.97□□□□□ -0.65
NEDD9-210ENST00000505589 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 ZBTB8OSQ8IWT0 167 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 FEZF2Q8TBJ5 459 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 C2orf40Q9H1Z8 148 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 TRPV5Q9NQA5 729 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 PCDHA12Q9UN75 941 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 HES2Q9Y543 173 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 FANCMQ8IYD8 2048 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 ZNF292O60281 2723 aa10.97□□□□□ -0.65
NEDD9-210ENST00000505589 CACNA1IQ9P0X4 2223 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 N4BP3O15049 544 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 CCL16O15467 120 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 EPB41L2O43491 1005 aaKnown RBP10.96□□□□□ -0.65
NEDD9-210ENST00000505589 CDC45O75419 566 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 SLITRK3O94933 977 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 NPTXRO95502 500 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 LRG1P02750 347 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 RPL17P18621 184 aaKnown RBP10.96□□□□□ -0.65
NEDD9-210ENST00000505589 OR1D2P34982 312 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 ARL2P36404 184 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
NEDD9-210ENST00000505589 MBTD1Q05BQ5 628 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 ST3GAL2Q16842 350 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 ANKS3Q6ZW76 656 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 ELMOD1Q8N336 334 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 GSTCDQ8NEC7 633 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 SLC7A14Q8TBB6 771 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 E2F7Q96AV8 911 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 MSANTD3Q96H12 275 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 DYDC2Q96IM9 177 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 UROC1Q96N76 676 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 TRMT61BQ9BVS5 477 aaKnown RBP10.96□□□□□ -0.65
NEDD9-210ENST00000505589 GPR88Q9GZN0 384 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 BRD9Q9H8M2 597 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 ZFP14Q9HCL3 533 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 BRMS1Q9HCU9 246 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 VAV3Q9UKW4 847 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 MAFFQ9ULX9 164 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 BACE2Q9Y5Z0 518 aa10.96□□□□□ -0.65
NEDD9-210ENST00000505589 DCDC2BA2VCK2 349 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 TMEM189-UBE2V1I3L0A0 370 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 LRRN2O75325 713 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 REC8O95072 547 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 TARSP26639 723 aaKnown RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 HSPA4P34932 840 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 CXCL12P48061 93 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 FAM187BQ17R55 369 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 RTP2Q5QGT7 225 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 CYP4A22Q5TCH4 519 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 NCAPH2Q6IBW4 605 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 IQCEQ6IPM2 695 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 PRSS55Q6UWB4 352 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 ZNF579Q8NAF0 562 aaKnown RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 LEMD2Q8NC56 503 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 MCPH1Q8NEM0 835 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 ZNF461Q8TAF7 563 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 ITFG1Q8TB96 612 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 WASF1Q92558 559 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 B3GALT6Q96L58 329 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 NXF3Q9H4D5 531 aaKnown RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 PRMT8Q9NR22 394 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 RGL1Q9NZL6 768 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 KLK14Q9P0G3 267 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 DNMT3BQ9UBC3 853 aaKnown RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 MTF2Q9Y483 593 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-210ENST00000505589 DMXL1Q9Y485 3027 aa10.95□□□□□ -0.66
NEDD9-210ENST00000505589 DOCK8Q8NF50 2099 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 OTOGLQ3ZCN5 2332 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 H7C4K7 107 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 SLC30A4O14863 429 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 SLC37A4O43826 429 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 KRT37O76014 449 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 B3GAT3O94766 335 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 CD72P21854 359 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 CAPSQ13938 189 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 CTTNQ14247 550 aaKnown RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 MAPK6Q16659 721 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 AMHR2Q16671 573 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 RUFY3Q7L099 469 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 NPAS3Q8IXF0 933 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 DEPDC1BQ8WUY9 529 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 MCRS1Q96EZ8 462 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 DDX27Q96GQ7 796 aaKnown RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 ZNF512Q96ME7 567 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 HSD17B14Q9BPX1 270 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 KXD1Q9BQD3 176 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 EIF2AK1Q9BQI3 630 aaKnown RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 CHRDQ9H2X0 955 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 HEBP1Q9NRV9 189 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 BMP2KQ9NSY1 1161 aaPredicted RBP10.94□□□□□ -0.66
NEDD9-210ENST00000505589 MTRRQ9UBK8 725 aa10.94□□□□□ -0.66
NEDD9-210ENST00000505589 SNX14Q9Y5W7 946 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms