RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 EARS2Q5JPH6 523 aaKnown RBP5.5□□□□□ -1.53
CDH9-203ENST00000505045 FBXO47Q5MNV8 452 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 RAD9AQ99638 391 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 SDF4Q9BRK5 362 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 SMARCAD1Q9H4L7 1026 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 PPP4R2Q9NY27 417 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 THEGQ9P2T0 379 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 KCNJ14Q9UNX9 436 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 CYP46A1Q9Y6A2 500 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 MYO15AQ9UKN7 3530 aa5.5□□□□□ -1.53
CDH9-203ENST00000505045 VPS13AQ96RL7 3174 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 MSH4O15457 936 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 MAFGO15525 162 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 CHMP2AO43633 222 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 SLC37A4O43826 429 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 ZNF862O60290 1169 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 MGEA5O60502 916 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 CSPG5O95196 566 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 PARNO95453 639 aaKnown RBP5.49□□□□□ -1.53
CDH9-203ENST00000505045 C22orf31O95567 290 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 GNAT1P11488 350 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 PSMA5P28066 241 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 CIITAP33076 1130 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 ZNF76P36508 570 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 GATMP50440 423 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 AK2P54819 239 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 ERVK-21P61565 698 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 MRPS6P82932 125 aaKnown RBP5.49□□□□□ -1.53
CDH9-203ENST00000505045 TAF2Q6P1X5 1199 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 NIPA1Q7RTP0 329 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 RPAINQ86UA6 219 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 RTN4RL1Q86UN2 441 aaPredicted RBP5.49□□□□□ -1.53
CDH9-203ENST00000505045 GALNT12Q8IXK2 581 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 SEPT8Q92599 483 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 TOP1MTQ969P6 601 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 SH2D3AQ9BRG2 576 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 ZNF577Q9BSK1 485 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 TM6SF1Q9BZW5 370 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 TMX1Q9H3N1 280 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 SOX17Q9H6I2 414 aaPredicted RBP5.49□□□□□ -1.53
CDH9-203ENST00000505045 AZI2Q9H6S1 392 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 C6orf50Q9HD87 102 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 PDRG1Q9NUG6 133 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 DMDP11532 3685 aa5.49□□□□□ -1.53
CDH9-203ENST00000505045 EPB41L2O43491 1005 aaKnown RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 EFCAB14O75071 495 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 AMHP03971 560 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 VTNP04004 478 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 POU3F3P20264 500 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 CLCN3P51790 818 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 SETQ01105 290 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 C19orf57Q0VDD7 668 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 DRP2Q13474 957 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 SWSAP1Q6NVH7 229 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 MTHFD1LQ6UB35 978 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 TSHZ1Q6ZSZ6 1077 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 PLPPR4Q7Z2D5 763 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 NECAB1Q8N987 351 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 CCDC148Q8NFR7 591 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 TBCKQ8TEA7 893 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ATP8B4Q8TF62 1192 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ZNF274Q96GC6 653 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 ZNF668Q96K58 619 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 FAM129BQ96TA1 746 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 YME1L1Q96TA2 773 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 UNC45AQ9H3U1 944 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ZNF302Q9NR11 478 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 PCDHA4Q9UN74 947 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 GINS2Q9Y248 185 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 PCDHA2Q9Y5H9 948 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ADGRA3Q8IWK6 1321 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 A0A1W2PP55 124 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 KIF28PB7ZC32 967 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 JAK2O60674 1132 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 DEXIO95424 95 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 IGLV1-40P01703 118 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ESRRAP11474 423 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 FDPSP14324 419 aaKnown RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 IBSPP21815 317 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 KLRC1P26715 233 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 GNA11P29992 359 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 NLRP5P59047 1200 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 AKAP17AQ02040 695 aaKnown RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 PRKCEQ02156 737 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 SSRP1Q08945 709 aaKnown RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 ME3Q16798 604 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 INF2Q27J81 1249 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 KIZQ2M2Z5 673 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 EPC2Q52LR7 807 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ZNF746Q6NUN9 644 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 B3GNT9Q6UX72 402 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 TEX2Q8IWB9 1127 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 KIAA0319LQ8IZA0 1049 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 BLIDQ8IZY5 108 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 LRRC71Q8N4P6 559 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 LINC01465Q8N7H1 131 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 DAGLBQ8NCG7 672 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 ETNPPLQ8TBG4 499 aa5.48□□□□□ -1.53
CDH9-203ENST00000505045 CCDC12Q8WUD4 166 aaPredicted RBP5.48□□□□□ -1.53
CDH9-203ENST00000505045 SLC5A5Q92911 643 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms