RNA–Protein interactions for RNA: ENST00000504956.5

AFF1-205, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,668 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-205ENST00000504956 STX1AQ16623 288 aa17.24■□□□□ 0.35
AFF1-205ENST00000504956 CMTR2Q8IYT2 770 aaKnown RBP17.24■□□□□ 0.35
AFF1-205ENST00000504956 GSTCDQ8NEC7 633 aa17.24■□□□□ 0.35
AFF1-205ENST00000504956 TBC1D13Q9NVG8 400 aa17.24■□□□□ 0.35
AFF1-205ENST00000504956 PCDHA11Q9Y5I1 949 aa17.24■□□□□ 0.35
AFF1-205ENST00000504956 PLXNA4Q9HCM2 1894 aa17.24■□□□□ 0.35
AFF1-205ENST00000504956 ARHGEF15O94989 841 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 CA3P07451 260 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 CASP4P49662 377 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 LRRC63Q05C16 580 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 PPP2R3AQ06190 1150 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 TYRO3Q06418 890 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 EDRF1Q3B7T1 1238 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 CEP135Q66GS9 1140 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 LRRC55Q6ZSA7 311 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 SLC9A9Q8IVB4 645 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 BRSK2Q8IWQ3 736 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 LRRC43Q8N309 656 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 DMAC2Q9NW81 257 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 RBAKQ9NYW8 714 aaPredicted RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 LACTBL1A8MY62 500 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 WNT7BP56706 349 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 RNASELQ05823 741 aaKnown RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 ADAM9Q13443 819 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 NFIL3Q16649 462 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 ZSCAN23Q3MJ62 389 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 LRIT3Q3SXY7 679 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 TTI2Q6NXR4 508 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 ALKAL1Q6UXT8 129 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 C11orf57Q6ZUT1 292 aaPredicted RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 SPRED2Q7Z698 418 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 FIBCD1Q8N539 461 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 FBXL18Q96ME1 805 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 ZMAT2Q96NC0 199 aaKnown RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 MRPL9Q9BYD2 267 aaKnown RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 NKX2-4Q9H2Z4 354 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 ANO10Q9NW15 660 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 CNTN3Q9P232 1028 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 DACH1Q9UI36 760 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 MSRAQ9UJ68 235 aa17.23■□□□□ 0.35
AFF1-205ENST00000504956 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
AFF1-205ENST00000504956 CHD9Q3L8U1 2897 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 BICDL2A1A5D9 508 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 ZNF233A6NK53 670 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 INPPL1O15357 1258 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 B4GALT3O60512 393 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 LETM1O95202 739 aaPredicted RBP17.22■□□□□ 0.35
AFF1-205ENST00000504956 SMAD3P84022 425 aaKnown RBP17.22■□□□□ 0.35
AFF1-205ENST00000504956 RAB30Q15771 203 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 MED15Q96RN5 788 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 DUSP9Q99956 384 aaKnown RBP17.22■□□□□ 0.35
AFF1-205ENST00000504956 DNAJC25Q9H1X3 360 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 RWDD2AQ9UIY3 292 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 CDH23Q9H251 3354 aa17.22■□□□□ 0.35
AFF1-205ENST00000504956 SMIM28A0A1B0GU29 152 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 DNAJB2P25686 324 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 RPL13P26373 211 aaKnown RBP17.21■□□□□ 0.35
AFF1-205ENST00000504956 SCN1AP35498 2009 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 GRIK3Q13003 919 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 XKR4Q5GH76 650 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 SPOUT1Q5T280 376 aaKnown RBP17.21■□□□□ 0.35
AFF1-205ENST00000504956 ZNF280BQ86YH2 543 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 TMEM130Q8N3G9 435 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 TMEM174Q8WUU8 243 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 GZF1Q9H116 711 aaPredicted RBP17.21■□□□□ 0.35
AFF1-205ENST00000504956 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 FRMD4BQ9Y2L6 1034 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 COL4A4P53420 1690 aaPredicted RBP17.21■□□□□ 0.35
AFF1-205ENST00000504956 CHD7Q9P2D1 2997 aa17.21■□□□□ 0.35
AFF1-205ENST00000504956 LINC01553A4QN01 128 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 SOX1O00570 391 aaPredicted RBP17.2■□□□□ 0.34
AFF1-205ENST00000504956 CETN3O15182 167 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 ZC3H11AO75152 810 aaKnown RBP eCLIP17.2■□□□□ 0.34
AFF1-205ENST00000504956 AKAP3O75969 853 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 DDHD2O94830 711 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 THP07101 528 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 NFICP08651 508 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 CYP24A1Q07973 514 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 MYBPC2Q14324 1141 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 JADE1Q6IE81 842 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 KIF12Q96FN5 646 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 PPP1R10Q96QC0 940 aaKnown RBP17.2■□□□□ 0.34
AFF1-205ENST00000504956 CWH43Q9H720 699 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 NRDE2Q9H7Z3 1164 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 PLEKHA5Q9HAU0 1116 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 GOLGA2P5Q9HBQ8 144 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 PDE11AQ9HCR9 933 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 DNAJB4Q9UDY4 337 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 ATG2AQ2TAZ0 1938 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 IL18RAPO95256 599 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 PBX3P40426 434 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 FKBP3Q00688 224 aaKnown RBP17.2■□□□□ 0.34
AFF1-205ENST00000504956 NAB2Q15742 525 aa17.2■□□□□ 0.34
AFF1-205ENST00000504956 ANO6Q4KMQ2 910 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms