RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 PTPRHQ9HD43 1115 aa14.07□□□□□ -0.16
RNF4-206ENST00000504782 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
RNF4-206ENST00000504782 TNFSF13BQ9Y275 285 aa14.07□□□□□ -0.16
RNF4-206ENST00000504782 USTQ9Y2C2 406 aa14.07□□□□□ -0.16
RNF4-206ENST00000504782 CITO14578 2027 aa14.07□□□□□ -0.16
RNF4-206ENST00000504782 I3L4J1 428 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 ABLIM1O14639 778 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 SLC16A4O15374 487 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 AVPR2P30518 371 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 CLCNKBP51801 687 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 EFNA5P52803 228 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
RNF4-206ENST00000504782 DCAF4L1Q3SXM0 396 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 RILPL1Q5EBL4 403 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 C15orf39Q6ZRI6 1047 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 CCDC149Q6ZUS6 474 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 SUGP1Q8IWZ8 645 aaKnown RBP14.06□□□□□ -0.16
RNF4-206ENST00000504782 SMG7Q92540 1137 aaKnown RBP14.06□□□□□ -0.16
RNF4-206ENST00000504782 ZMAT2Q96NC0 199 aaKnown RBP14.06□□□□□ -0.16
RNF4-206ENST00000504782 TBC1D32Q96NH3 1257 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 MYADMQ96S97 322 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 NT5C3AQ9H0P0 336 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 KMT5AQ9NQR1 393 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 ARHGAP28Q9P2N2 729 aa14.06□□□□□ -0.16
RNF4-206ENST00000504782 SF3B1O75533 1304 aaKnown RBP eCLIP14.06□□□□□ -0.163e-6■■■■■ 137.9
RNF4-206ENST00000504782 SMIM28A0A1B0GU29 152 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 H3BQV1 296 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 BRCC3P46736 316 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 SLC12A3P55017 1021 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 GRIN1Q05586 938 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 SEZ6Q53EL9 994 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 HYIQ5T013 277 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 ALKAL1Q6UXT8 129 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 RSPO2Q6UXX9 243 aaPredicted RBP14.05□□□□□ -0.16
RNF4-206ENST00000504782 UBALD2Q8IYN6 164 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 TTPALQ9BTX7 342 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 KCNH6Q9H252 994 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 TMEM134Q9H6X4 195 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 KCNK12Q9HB15 430 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 WDR6Q9NNW5 1121 aaKnown RBP14.05□□□□□ -0.16
RNF4-206ENST00000504782 STK24Q9Y6E0 443 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 PHLPP2Q6ZVD8 1323 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 NOTCH4Q99466 2003 aa14.05□□□□□ -0.16
RNF4-206ENST00000504782 NARSO43776 548 aaKnown RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 PAPLNO95428 1278 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 PROZP22891 400 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 GRM5P41594 1212 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 MRE11P49959 708 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 NTHL1P78549 312 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 DMP1Q13316 513 aaPredicted RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 PSMD5Q16401 504 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 ZNF568Q3ZCX4 644 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 TMEM119Q4V9L6 283 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 ARSHQ5FYA8 562 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 OTOP3Q7RTS5 596 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 TMEM105Q8N8V8 129 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 SYT2Q8N9I0 419 aaPredicted RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 ACSF2Q96CM8 615 aaPredicted RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 MRPL4Q9BYD3 311 aaKnown RBP14.04□□□□□ -0.16
RNF4-206ENST00000504782 HAPLN2Q9GZV7 340 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.04□□□□□ -0.16
RNF4-206ENST00000504782 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 KIF3AQ9Y496 699 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 CLUHO75153 1309 aa14.04□□□□□ -0.16
RNF4-206ENST00000504782 ZMYND10O75800 440 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 B3GAT3O94766 335 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 PLA2G4BP0C869 781 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 HARSP12081 509 aaKnown RBP14.03□□□□□ -0.16
RNF4-206ENST00000504782 FGFR3P22607 806 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 GUCY2CP25092 1073 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 TKTP29401 623 aaKnown RBP14.03□□□□□ -0.16
RNF4-206ENST00000504782 GBP2P32456 591 aaPredicted RBP14.03□□□□□ -0.16
RNF4-206ENST00000504782 UPP1Q16831 310 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 XKR4Q5GH76 650 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 GPR65Q8IYL9 337 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 TMEM161BQ8NDZ6 487 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 HDAC7Q8WUI4 952 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 C18orf25Q96B23 403 aaPredicted RBP14.03□□□□□ -0.16
RNF4-206ENST00000504782 DRC1Q96MC2 740 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 NTPCRQ9BSD7 190 aaKnown RBP14.03□□□□□ -0.16
RNF4-206ENST00000504782 PRKD2Q9BZL6 878 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 PLEKHA4Q9H4M7 779 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 PIDD1Q9HB75 910 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 FAM86C1Q9NVL1 165 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 FBXW11Q9UKB1 542 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 ZDBF2Q9HCK1 2354 aa14.03□□□□□ -0.16
RNF4-206ENST00000504782 COL4A3Q01955 1670 aa14.02□□□□□ -0.16
RNF4-206ENST00000504782 MAPTP10636 758 aaKnown RBP14.02□□□□□ -0.17
RNF4-206ENST00000504782 PLS3P13797 630 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 NPR3P17342 541 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 OR1D2P34982 312 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 TDGQ13569 410 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 DHX8Q14562 1220 aaKnown RBP14.02□□□□□ -0.17
RNF4-206ENST00000504782 DCLRE1AQ6PJP8 1040 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 MPZL3Q6UWV2 235 aa14.02□□□□□ -0.17
RNF4-206ENST00000504782 SNX27Q96L92 541 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms