RNA–Protein interactions for RNA: ENST00000504531.2

CASC9-201, Transcript of cancer susceptibility 9, humanhuman

TSL 1 (best) BASIC

Gene CASC9, Length 1,164 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC9-201ENST00000504531 ATP2B2Q01814 1243 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 MLLT1Q03111 559 aaPredicted RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 GFPT1Q06210 699 aaPredicted RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 PAK2Q13177 524 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 ZSCAN26Q16670 478 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 CEP55Q53EZ4 464 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 TDRD12Q587J7 1177 aaKnown RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 RTKN2Q8IZC4 609 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 RASGEF1CQ8N431 466 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 TBC1D5Q92609 795 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 SLC35C1Q96A29 364 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 INPP4AQ96PE3 977 aaPredicted RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 IWS1Q96ST2 819 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 GMLQ99445 158 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 LPIN3Q9BQK8 851 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 PLVAPQ9BX97 442 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 STK33Q9BYT3 514 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 FAM107BQ9H098 131 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 PARVGQ9HBI0 331 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 ZCCHC17Q9NP64 241 aaKnown RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 SUCLA2Q9P2R7 463 aaPredicted RBP9.56□□□□□ -0.88
CASC9-201ENST00000504531 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
CASC9-201ENST00000504531 A0A087X0T9 212 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 NKRFO15226 690 aaKnown RBP eCLIP9.55□□□□□ -0.88
CASC9-201ENST00000504531 TGFB1I1O43294 461 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 FZD6O60353 706 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 SLITRK3O94933 977 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 FAM228BP0C875 321 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 EIF2AK2P19525 551 aaKnown RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 ABCD1P33897 745 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 ZNF76P36508 570 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 STAT1P42224 750 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 HNRNPH2P55795 449 aaKnown RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 KCNA1Q09470 495 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 HYAL2Q12891 473 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 CUL1Q13616 776 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 RPS6KA1Q15418 735 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 KIAA0753Q2KHM9 967 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 PERM1Q5SV97 790 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 C8orf74Q6P047 294 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 XRRA1Q6P2D8 792 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 HS2ST1Q7LGA3 356 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 ZNF720Q7Z2F6 126 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 SFR1Q86XK3 245 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 MCF2L2Q86YR7 1114 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 CLEC10AQ8IUN9 316 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 KIAA0825Q8IV33 1275 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 GLIS3Q8NEA6 775 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 MORC4Q8TE76 937 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 AFAP1L1Q8TED9 768 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 SMCR8Q8TEV9 937 aaPredicted RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 SCFD2Q8WU76 684 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 NUDT8Q8WV74 236 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 TAF4BQ92750 862 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 KCNN1Q92952 543 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 HVCN1Q96D96 273 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 TRIM11Q96F44 468 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 SPACA7Q96KW9 195 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 NSUN5Q96P11 429 aaKnown RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 SPAG5Q96R06 1193 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 P2RX7Q99572 595 aaKnown RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 TMEM206Q9H813 350 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 VCPKMTQ9H867 229 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 MLXIPQ9HAP2 919 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 VPS18Q9P253 973 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 KCNG1Q9UIX4 513 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 DBR1Q9UK59 544 aaKnown RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 ZHX1Q9UKY1 873 aaPredicted RBP9.55□□□□□ -0.88
CASC9-201ENST00000504531 WDR90Q96KV7 1748 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 MYH10P35580 1976 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 SCN9AQ15858 1988 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 ASTN1O14525 1302 aa9.55□□□□□ -0.88
CASC9-201ENST00000504531 GOLGA6BA6NDN3 693 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 AKAP3O75969 853 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 DDNO94850 711 aaPredicted RBP9.54□□□□□ -0.88
CASC9-201ENST00000504531 GH2P01242 217 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 H2AFZP0C0S5 128 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 NID1P14543 1247 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 KLRC1P26715 233 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 HSD17B4P51659 736 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 RBM5P52756 815 aaKnown RBP eCLIP9.54□□□□□ -0.88
CASC9-201ENST00000504531 LBX1P52954 281 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 SLC20A2Q08357 652 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 PABPC4Q13310 644 aaKnown RBP eCLIP9.54□□□□□ -0.88
CASC9-201ENST00000504531 RAPGEF1Q13905 1077 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 RASA3Q14644 834 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 EAPPQ56P03 285 aaPredicted RBP9.54□□□□□ -0.88
CASC9-201ENST00000504531 LRCH2Q5VUJ6 765 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 ALKBH5Q6P6C2 394 aaKnown RBP9.54□□□□□ -0.88
CASC9-201ENST00000504531 LRIG3Q6UXM1 1119 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 C8orf86Q6ZUL3 223 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 HFE2Q6ZVN8 426 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 H2AFVQ71UI9 128 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 NELFCDQ8IXH7 590 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 EFCAB13Q8IY85 973 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 IQCKQ8N0W5 287 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 LRRC57Q8N9N7 239 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 USP38Q8NB14 1042 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 AGBL3Q8NEM8 1001 aa9.54□□□□□ -0.88
CASC9-201ENST00000504531 RDM1Q8NG50 284 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms