RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 C12orf56Q8IXR9 622 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 TMEM192Q8IY95 271 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 LRRC43Q8N309 656 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 TRIML1Q8N9V2 468 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 TMEM174Q8WUU8 243 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 LRCH3Q96II8 777 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 ZFP42Q96MM3 310 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 SAMD11Q96NU1 681 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 CWH43Q9H720 699 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 PLEKHA5Q9HAU0 1116 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 AGPAT3Q9NRZ7 376 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 TYW1Q9NV66 732 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 TBC1D13Q9NVG8 400 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 INPP5FQ9Y2H2 1132 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 RWDD3Q9Y3V2 267 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 MRPL42Q9Y6G3 142 aaKnown RBP12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 VWA8A3KMH1 1905 aa12.98□□□□□ -0.33
PDLIM5-208ENST00000504489 PDXKO00764 312 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 ARHGEF15O94989 841 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 ADRB2P07550 413 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 PPP1R2P41236 205 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 PRCPP42785 496 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 AFF1P51825 1210 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 OSTNP61366 133 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 ERVK-21P61565 698 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 SLC10A6Q3KNW5 377 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 SEZ6Q53EL9 994 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 SMYD4Q8IYR2 804 aaPredicted RBP12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 RPS6KC1Q96S38 1066 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 CBWD1Q9BRT8 395 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 ZNF576Q9H609 170 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 RPF1Q9H9Y2 349 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 MIOSQ9NXC5 875 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 MTCL1Q9Y4B5 1905 aaKnown RBP12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 TRANK1O15050 2925 aa12.97□□□□□ -0.33
PDLIM5-208ENST00000504489 TTC26A0AVF1 554 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 PTGESO14684 152 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 CLIC2O15247 247 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 MEFVO15553 781 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 EXTL3O43909 919 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 POMCP01189 267 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 KCNE1P15382 129 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 BMP6P22004 513 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 BMPR1AP36894 532 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 TNFSF9P41273 254 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 ACOT2P49753 483 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 SCNN1GP51170 649 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 GRIK3Q13003 919 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 MYBPC2Q14324 1141 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 HSP90AA2PQ14568 343 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 ENOX2Q16206 610 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 NFIL3Q16649 462 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 ISM2Q6H9L7 571 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 CRELD2Q6UXH1 353 aaPredicted RBP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 SLC9A9Q8IVB4 645 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 CD302Q8IX05 232 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 ADSSL1Q8N142 457 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 GPD1LQ8N335 351 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 SNX27Q96L92 541 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 FBXL18Q96ME1 805 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 TSPAN18Q96SJ8 248 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 NRDE2Q9H7Z3 1164 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 KIAA1586Q9HCI6 787 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 AAASQ9NRG9 546 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 HSPBP1Q9NZL4 362 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 CNTN3Q9P232 1028 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
PDLIM5-208ENST00000504489 PRRC2BQ5JSZ5 2229 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 SMIM28A0A1B0GU29 152 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 C5orf67F2Z3F1 127 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 BIN1O00499 593 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 CALUO43852 315 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 DDHD2O94830 711 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 RB1P06400 928 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 THP07101 528 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 CXCL8P10145 99 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 LAG3P18627 525 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 DSC1Q08554 894 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 STIM1Q13586 685 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 NAB2Q15742 525 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 ZCWPW2Q504Y3 356 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 SPOUT1Q5T280 376 aaKnown RBP12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 ZNF697Q5TEC3 545 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 CENPPQ6IPU0 288 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 ZNF280BQ86YH2 543 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
PDLIM5-208ENST00000504489 ZSWIM2Q8NEG5 633 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms