RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 RSPH14Q9UHP6 348 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 CDH7Q9ULB5 785 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 FHOD1Q9Y613 1164 aa5.7□□□□□ -1.5
HTT-202ENST00000502820 WDR87Q6ZQQ6 2873 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 USP24Q9UPU5 2620 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SPEGQ15772 3267 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 GPR179Q6PRD1 2367 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 A0A0U1RQF3 1178 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CCDC69A6NI79 296 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 TMCO5BA8MYB1 307 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 NRP1O14786 923 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 TGM5O43548 720 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SKILP12757 684 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ITGB5P18084 799 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 RXRAP19793 462 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SYT1P21579 422 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 PSMA5P28066 241 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 HOXC13P31276 330 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ZNF165P49910 485 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 RCAN1P53805 252 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ACTR2P61160 394 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CREB5Q02930 508 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 C19orf57Q0VDD7 668 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 DSC3Q14574 896 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ELF2Q15723 593 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 LIN9Q5TKA1 542 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 FAM160B1Q5W0V3 765 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 PCNX4Q63HM2 1172 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SWSAP1Q6NVH7 229 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 EFCAB12Q6NXP0 572 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 PPP4R3CPQ6ZMV5 832 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 NFXL1Q6ZNB6 911 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 DHX32Q7L7V1 743 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 LONP2Q86WA8 852 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 MICU3Q86XE3 530 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CEP57Q86XR8 500 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SPATS2Q86XZ4 545 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 CEP57L1Q8IYX8 460 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CMTR1Q8N1G2 835 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 FBXL16Q8N461 479 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 FANCBQ8NB91 859 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 DEFB124Q8NES8 71 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ITFG1Q8TB96 612 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 TSC1Q92574 1164 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 RABGGTAQ92696 567 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ERCC4Q92889 916 aaPredicted RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 ZNF707Q96C28 371 aaPredicted RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 RRP36Q96EU6 259 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 RPS6KC1Q96S38 1066 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 VN1R3Q9BXE9 311 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 OSBPL6Q9BZF3 934 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 PRKD2Q9BZL6 878 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 BRD9Q9H8M2 597 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CBX8Q9HC52 389 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ARFGAP3Q9NP61 516 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 RBM12Q9NTZ6 932 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 ANO10Q9NW15 660 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 DACT1Q9NYF0 836 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 KLK13Q9UKR3 277 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CFAP45Q9UL16 551 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 PIN4Q9Y237 131 aaKnown RBP5.69□□□□□ -1.5
HTT-202ENST00000502820 JRKLQ9Y4A0 524 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.69□□□□□ -1.5
HTT-202ENST00000502820 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 SLC12A7Q9Y666 1083 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 ZNF292O60281 2723 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CEP250Q9BV73 2442 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 CNTNAP5Q8WYK1 1306 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 KDM3AQ9Y4C1 1321 aa5.69□□□□□ -1.5
HTT-202ENST00000502820 NID2Q14112 1375 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 SPDYE3A6NKU9 549 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 SHISA7A6NL88 538 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 MEIS3P2A8K0S8 358 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 VGLL3A8MV65 326 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 MAN2B1O00754 1011 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 TM4SF5O14894 197 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 CBFA2T2O43439 604 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 HBP1O60381 514 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 GPR32O75388 356 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 DDHD2O94830 711 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 HMGB1P09429 215 aaKnown RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 CCDC172P0C7W6 258 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 ZNF806P0C7X5 589 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 ATP2B1P20020 1258 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 CCNE1P24864 410 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 TMOD1P28289 359 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 ZNF76P36508 570 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 MPLP40238 635 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 RPS9P46781 194 aaKnown RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 GLUD2P49448 558 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 PSEN1P49768 467 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 CLCN6P51797 869 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 KPNA1P52294 538 aaPredicted RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 LIMK1P53667 647 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 ETF1P62495 437 aaKnown RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 PLCB2Q00722 1185 aa5.68□□□□□ -1.5
HTT-202ENST00000502820 SETQ01105 290 aaPredicted RBP5.68□□□□□ -1.5
HTT-202ENST00000502820 KRT32Q14532 448 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms