RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 COL6A5A8TX70 2615 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 MYLKQ15746 1914 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 PKD1L1Q8TDX9 2849 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 CAPN5O15484 640 aaPredicted RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 SKIP12755 728 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 ATP5JP18859 108 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 BCKDHBP21953 392 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 FCARP24071 287 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 PDE1AP54750 535 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 CCINQ13939 588 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 DDX53Q86TM3 631 aaKnown RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 MAP4K3Q8IVH8 894 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 NPAS3Q8IXF0 933 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 ITFG1Q8TB96 612 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 BAHD1Q8TBE0 780 aaPredicted RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 MOCOSQ96EN8 888 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 TMEM169Q96HH4 297 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 TMEM176AQ96HP8 235 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 KIF2CQ99661 725 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 GTPBP2Q9BX10 602 aaKnown RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 EMILIN2Q9BXX0 1053 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 EPN3Q9H201 632 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 KANSL2Q9H9L4 492 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 PIDD1Q9HB75 910 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 POLR3BQ9NW08 1133 aaPredicted RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 PCOLCE2Q9UKZ9 415 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 RTTNQ86VV8 2226 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 ATXN2Q99700 1313 aaKnown RBP5.98□□□□□ -1.45
FXN-205ENST00000498653 IGSF9BQ9UPX0 1349 aa5.98□□□□□ -1.45
FXN-205ENST00000498653 A1L4Q6 167 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 H3BRB1 525 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 PPFIA4O75335 1185 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 POLR3DP05423 398 aaPredicted RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 ATXN1LP0C7T5 689 aaKnown RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 GBP1P32455 592 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SMCPP49901 116 aaPredicted RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 UCNP55089 124 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 BCAR1P56945 870 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SNAP25P60880 206 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 USP4Q13107 963 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 PAK2Q13177 524 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 GRM2Q14416 872 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 C2orf27AQ580R0 203 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 PEAR1Q5VY43 1037 aaPredicted RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 TXNDC11Q6PKC3 985 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 AGMOQ6ZNB7 445 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SEPT14Q6ZU15 432 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SKAP1Q86WV1 359 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 ARID3BQ8IVW6 561 aaPredicted RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 PLPP7Q8NBV4 271 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 DAGLBQ8NCG7 672 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 FGF11Q92914 225 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 ZNF512BQ96KM6 892 aaPredicted RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 LPIN3Q9BQK8 851 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 BOLA2Q9H3K6 86 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 OSBPL3Q9H4L5 887 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 TUT1Q9H6E5 874 aaKnown RBP5.97□□□□□ -1.45
FXN-205ENST00000498653 TRPV5Q9NQA5 729 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 TMEM161AQ9NX61 479 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 ZDHHC7Q9NXF8 308 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SWAP70Q9UH65 585 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 SQORQ9Y6N5 450 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 PHLPP2Q6ZVD8 1323 aa5.97□□□□□ -1.45
FXN-205ENST00000498653 DOCK5Q9H7D0 1870 aa5.96□□□□□ -1.45
FXN-205ENST00000498653 NOTCH1P46531 2555 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 PLXND1Q9Y4D7 1925 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 PTPDC1A2A3K4 754 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 B4E1Z4 1266 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 ARNTLO00327 626 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 ATP9BO43861 1147 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 GLUD1P00367 558 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 LGALS2P05162 132 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TIMP2P16035 220 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 CALML3P27482 149 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 MRPS6P82932 125 aaKnown RBP5.96□□□□□ -1.46
FXN-205ENST00000498653 SLC14A1Q13336 389 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 LAMC2Q13753 1193 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 RTP5Q14D33 572 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TMEM266Q2M3C6 531 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 LINC00303Q3SY05 128 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 DGKKQ5KSL6 1271 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TTC22Q5TAA0 569 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TSHZ3Q63HK5 1081 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TANGO2Q6ICL3 276 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 TAF2Q6P1X5 1199 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 SLC24A5Q71RS6 500 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 GRASPQ7Z6J2 395 aaPredicted RBP5.96□□□□□ -1.46
FXN-205ENST00000498653 PHTF2Q8N3S3 785 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 SPATA20Q8TB22 786 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 PI4K2BQ8TCG2 481 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 DNAJB3Q8WWF6 145 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 ITPKCQ96DU7 683 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 CCDC17Q96LX7 622 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 HHIPQ96QV1 700 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 LGMNQ99538 433 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 DNAJC2Q99543 621 aaKnown RBP5.96□□□□□ -1.46
FXN-205ENST00000498653 BRD9Q9H8M2 597 aa5.96□□□□□ -1.46
FXN-205ENST00000498653 ATP6V0A4Q9HBG4 840 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms