RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CCDC22O60826 627 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 STK10O94804 968 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 OR6B1O95007 311 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 RPA3P35244 121 aaPredicted RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 MTM1Q13496 603 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 SLC51AQ86UW1 340 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 DAGLBQ8NCG7 672 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 MIPOL1Q8TD10 442 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 HEMGNQ9BXL5 484 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 FAM192AQ9GZU8 254 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 VPS37BQ9H9H4 285 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 STARD13Q9Y3M8 1113 aa13.91□□□□□ -0.18
GAPVD1-220ENST00000497580 SIGLEC16A6NMB1 481 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 OCRLQ01968 901 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 MECOMQ03112 1051 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 ZFYVE27Q5T4F4 411 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CCDC62Q6P9F0 684 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 OTOAQ7RTW8 1153 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 ST13P4Q8IZP2 240 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 RPGRQ92834 1020 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 GATA6Q92908 595 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 ASCC2Q9H1I8 757 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 SYNCQ9H7C4 482 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CHST7Q9NS84 486 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 PCYOX1Q9UHG3 505 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 C1orf167Q5SNV9 1468 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 TROVE2P10155 538 aaKnown RBP eCLIP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 PGM1P36871 562 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 PKN2Q16513 984 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CLNKQ7Z7G1 428 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CEP70Q8NHQ1 597 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 RFWD2Q8NHY2 731 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 KRT82Q9NSB4 513 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 DDX25Q9UHL0 483 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 TJP1Q07157 1748 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 PGM3O95394 542 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 NR3C1P04150 777 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 FAM163BP0C2L3 166 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 PSMC4P43686 418 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 CYP2J2P51589 502 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 AP1B1Q10567 949 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 DGKHQ86XP1 1220 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 MAPKAPK5Q8IW41 473 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 RBM12BQ8IXT5 1001 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 ARHGAP18Q8N392 663 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 ZNF384Q8TF68 577 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 C10orf82Q8WW14 230 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 DNAJC18Q9H819 358 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 KCNQ5Q9NR82 932 aa13.9□□□□□ -0.18
GAPVD1-220ENST00000497580 SIPA1L3O60292 1781 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 GSC2O15499 205 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 HSPA6P17066 643 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC1A5Q15758 541 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 GSTA5Q7RTV2 222 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 HIPK4Q8NE63 616 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 CLPTM1LQ96KA5 538 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 MTMR9Q96QG7 549 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 PHF12Q96QT6 1004 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 BTBD10Q9BSF8 475 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SPZ1Q9BXG8 430 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SIX2Q9NPC8 291 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC4A7Q9Y6M7 1214 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 NUMBLQ9Y6R0 609 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 EDF1O60869 148 aaKnown RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SUPT3HO75486 399 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 EYA4O95677 639 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 ABCD1P33897 745 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SYT2Q8N9I0 419 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 JDP2Q8WYK2 163 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SERPINA10Q9UK55 444 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 GRID1Q9ULK0 1009 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 RGPD5Q99666 1765 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 ANKRD62A6NC57 917 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 RSPH10B2B2RC85 870 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 RSPH10BP0C881 870 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 CYP4A11Q02928 519 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 MTMR2Q13614 643 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 MOGSQ13724 837 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 C1QTNF12Q5T7M4 302 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 RINLQ6ZS11 566 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 CYFIP1Q7L576 1253 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SDCCAG8Q86SQ7 713 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 TAB3Q8N5C8 712 aaPredicted RBP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SLC35C1Q96A29 364 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SAYSD1Q9NPB0 183 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 ZNF711Q9Y462 761 aa13.89□□□□□ -0.19
GAPVD1-220ENST00000497580 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 RFC4P35249 363 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 MAGEA8P43361 318 aa13.88□□□□□ -0.19
GAPVD1-220ENST00000497580 ADCY7P51828 1080 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms