RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 GREB1LQ9C091 1923 aaPredicted RBP5.77□□□□□ -1.49
CSMD3-208ENST00000497026 SMIM22K7EJ46 135 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 MEFVO15553 781 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-208ENST00000497026 PRKAB2O43741 272 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CTNND1O60716 968 aaKnown RBP5.76□□□□□ -1.49
CSMD3-208ENST00000497026 OFD1O75665 1012 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 MBD4O95243 580 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 C8BP07358 591 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 HOXC12P31275 282 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 GRIA2P42262 883 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 PLCD1P51178 756 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 GTF2A2P52657 109 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 RPL11P62913 178 aaKnown RBP5.76□□□□□ -1.49
CSMD3-208ENST00000497026 GABPAQ06546 454 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 DLX2Q07687 328 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CACNB2Q08289 660 aaPredicted RBP5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CRHR2Q13324 411 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 SLC9A5Q14940 896 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 ANKRD45Q5TZF3 282 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 DENND5AQ6IQ26 1287 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CERS3Q8IU89 383 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CELF2-AS1Q8N7Q2 184 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 CHAMP1Q96JM3 812 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 AFG3L2Q9Y4W6 797 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 ZHX2Q9Y6X8 837 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 ADGRA2Q96PE1 1338 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 MGAMO43451 1857 aa5.76□□□□□ -1.49
CSMD3-208ENST00000497026 PRICKLE3O43900 615 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 GLRX3O76003 335 aaKnown RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 CETPP11597 493 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 SHMT1P34896 483 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 PDE1AP54750 535 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 SNAPC2Q13487 334 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 NT5DC1Q5TFE4 455 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 PRRT2Q7Z6L0 340 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 ZSCAN30Q86W11 494 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 DCP2Q8IU60 420 aaKnown RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 FOXP4Q8IVH2 680 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 PPIL6Q8IXY8 311 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 TMEM145Q8NBT3 493 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 RCBTB1Q8NDN9 531 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 APPBP2Q92624 585 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 OSBP2Q969R2 916 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 TRMT2BQ96GJ1 504 aaKnown RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 GPATCH3Q96I76 525 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 CRNKL1Q9BZJ0 848 aaKnown RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 AP5M1Q9H0R1 490 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 SPATA6Q9NWH7 488 aaPredicted RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 STAP2Q9UGK3 403 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 ZBTB21Q9ULJ3 1066 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 R3HCC1Q9Y3T6 440 aaKnown RBP5.75□□□□□ -1.49
CSMD3-208ENST00000497026 PCDHA2Q9Y5H9 948 aa5.75□□□□□ -1.49
CSMD3-208ENST00000497026 PARP14Q460N5 1801 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 TRIM75PA6NK02 468 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 M0R2C6 588 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CXCL11O14625 94 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ERC2O15083 957 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 FOXP2O15409 715 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 HLA-DOAP06340 250 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CYP2D6P10635 497 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SYN1P17600 705 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GUCY1A2P33402 732 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 STAT5AP42229 794 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 NUCB1Q02818 461 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SKOR2Q2VWA4 1001 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 TATDN1Q6P1N9 297 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CD300LDQ6UXZ3 194 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ANKS3Q6ZW76 656 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 MILR1Q7Z6M3 343 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ANKRD23Q86SG2 305 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 FERMT3Q86UX7 667 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SLC44A5Q8NCS7 719 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ABHD8Q96I13 439 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 STRBPQ96SI9 672 aaKnown RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SEC62Q99442 399 aaKnown RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GORASP1Q9BQQ3 440 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CCDC94Q9BW85 323 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 PANK2Q9BZ23 570 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 RWDD1Q9H446 243 aaPredicted RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ZCCHC17Q9NP64 241 aaKnown RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 MCM9Q9NXL9 1143 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SERPINB13Q9UIV8 391 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 RLFQ13129 1914 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CYP2D7A0A087X1C5 515 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 UQCRHLA0A096LP55 91 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GSG1L2A8MUP6 293 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 PDHXO00330 501 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 RNF113AO15541 343 aaKnown RBP5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GPAA1O43292 621 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 TLR2O60603 784 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GH2P01242 217 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 UQCRHP07919 91 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 ASNSP08243 561 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CYP2C8P10632 490 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 CTGFP29279 349 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 GFRA1P56159 465 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SPP2Q13103 211 aa5.74□□□□□ -1.49
CSMD3-208ENST00000497026 SLC10A6Q3KNW5 377 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms