RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 GIMAP1Q8WWP7 306 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ELMO3Q96BJ8 720 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 CTAGE1Q96RT6 745 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 RPS6KC1Q96S38 1066 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 NAP1L4Q99733 375 aaKnown RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ASCC2Q9H1I8 757 aaPredicted RBP6.67□□□□□ -1.34
SSBP1-213ENST00000496622 KCTD10Q9H3F6 313 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 ETNK1Q9HBU6 452 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 HDAC6Q9UBN7 1215 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 TRIM10Q9UDY6 481 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 UBIAD1Q9Y5Z9 338 aa6.67□□□□□ -1.34
SSBP1-213ENST00000496622 RPTORQ8N122 1335 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 TMEM88BA6NKF7 163 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ZNF862O60290 1169 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 AKAP3O75969 853 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 EYA4O95677 639 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 IL2RAP01589 272 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 HARSP12081 509 aaKnown RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 NR2F2P24468 414 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 PTGIRP43119 386 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 LAMB3Q13751 1172 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 CRYMQ14894 314 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 KBTBD12Q3ZCT8 623 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ZCWPW2Q504Y3 356 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 FKBP15Q5T1M5 1219 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 SWSAP1Q6NVH7 229 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 NEK10Q6ZWH5 1172 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 C14orf80Q86SX3 495 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 DNAAF5Q86Y56 855 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 FAM114A1Q8IWE2 563 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ATP11CQ8NB49 1132 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 N4BP2L2Q92802 583 aaPredicted RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 NDST4Q9H3R1 872 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 THAP9Q9H5L6 903 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 NLRC4Q9NPP4 1024 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ABHD10Q9NUJ1 306 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 PPP2R2CQ9Y2T4 447 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 SPO11Q9Y5K1 396 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 LINC00854A0A1B0GVQ3 168 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 BACH1O14867 736 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 RTN2O75298 545 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 TBCAO75347 108 aaKnown RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 FAM13AO94988 1023 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ACTN1P12814 892 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 YWHABP31946 246 aaKnown RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 IREB2P48200 963 aaKnown RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 CLDN10P78369 228 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 CYP27A1Q02318 531 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ARID5AQ03989 594 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 WDR59Q6PJI9 974 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 LBX2Q6XYB7 198 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ANO5Q75V66 913 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 REXO1L1PQ8IX06 675 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 MRRFQ96E11 262 aaKnown RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ZNF668Q96K58 619 aaPredicted RBP6.66□□□□□ -1.34
SSBP1-213ENST00000496622 C12orf42Q96LP6 360 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 WDR24Q96S15 920 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 FIZ1Q96SL8 496 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 PORCNQ9H237 461 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 PCIF1Q9H4Z3 704 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 ACAD9Q9H845 621 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 RBPJLQ9UBG7 517 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 DNAI1Q9UI46 699 aa6.66□□□□□ -1.34
SSBP1-213ENST00000496622 FRMD3A2A2Y4 597 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 ARHGEF35A5YM69 484 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TGFB1I1O43294 461 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SLC26A4O43511 780 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 CPP00450 1065 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 PNMA6AP0CW24 399 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 EEF1GP26641 437 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 RARRES1P49788 294 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SCNN1BP51168 640 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 HERVK_113P62684 666 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 FKBP3Q00688 224 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 NEDD9Q14511 834 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 EPHA7Q15375 998 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 CCDC40Q4G0X9 1142 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 DCAF17Q5H9S7 520 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TCERG1LQ5VWI1 586 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 LLGL2Q6P1M3 1020 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 CCDC60Q8IWA6 550 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SLC7A5P1Q8MH63 180 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 DCLK2Q8N568 766 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 NSUN6Q8TEA1 469 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 PPP1R13LQ8WUF5 828 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 MOV10L1Q9BXT6 1211 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SPATC1LQ9H0A9 340 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 TMEM110-MUSTN1A8MSY1 372 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 EIF3CLB5ME19 914 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 ARHGAP6O43182 974 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 STX10O60499 249 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 RTN3O95197 1032 aaPredicted RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 P4HBP07237 508 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 QARSP47897 775 aaKnown RBP6.65□□□□□ -1.34
SSBP1-213ENST00000496622 CYP2J2P51589 502 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 PEX3P56589 373 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 PTSQ03393 145 aa6.65□□□□□ -1.34
SSBP1-213ENST00000496622 SPAG1Q07617 926 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms