RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 MFSD14AQ96MC6 490 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 SMOC2Q9H3U7 446 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 KMT5AQ9NQR1 393 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 FNIP2Q9P278 1114 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 USTQ9Y2C2 406 aa15.69■□□□□ 0.1
VTI1A-209ENST00000496445 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 BRD1O95696 1058 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 ASGR2P07307 311 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 SPATA31D3P0C874 917 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 GRM5P41594 1212 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 GRIN1Q05586 938 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 CD300LGQ6UXG3 332 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 SPATA31D4Q6ZUB0 917 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 CCDC149Q6ZUS6 474 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 ZBTB33Q86T24 672 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 PALB2Q86YC2 1186 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 SYT2Q8N9I0 419 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-209ENST00000496445 PBXIP1Q96AQ6 731 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 ZNF707Q96C28 371 aaPredicted RBP15.68■□□□□ 0.1
VTI1A-209ENST00000496445 TIPINQ9BVW5 301 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 TARS2Q9BW92 718 aaKnown RBP15.68■□□□□ 0.1
VTI1A-209ENST00000496445 MRPL4Q9BYD3 311 aaKnown RBP15.68■□□□□ 0.1
VTI1A-209ENST00000496445 NT5C3AQ9H0P0 336 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 C17orf75Q9HAS0 396 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 GOLGA2P5Q9HBQ8 144 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.68■□□□□ 0.1
VTI1A-209ENST00000496445 SORCS3Q9UPU3 1222 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
VTI1A-209ENST00000496445 DOCK6Q96HP0 2047 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 SLC16A4O15374 487 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 MEFVO15553 781 aaPredicted RBP15.67■□□□□ 0.1
VTI1A-209ENST00000496445 N4BP1O75113 896 aaKnown RBP15.67■□□□□ 0.1
VTI1A-209ENST00000496445 PLA2G4BP0C869 781 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 PLS3P13797 630 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 SOX4Q06945 474 aaPredicted RBP15.67■□□□□ 0.1
VTI1A-209ENST00000496445 MTMR3Q13615 1198 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 XKR4Q5GH76 650 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 LILRA6Q6PI73 481 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 ALKAL1Q6UXT8 129 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 KCTD17Q8N5Z5 321 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 LNX1Q8TBB1 728 aaPredicted RBP15.67■□□□□ 0.1
VTI1A-209ENST00000496445 SPIRE2Q8WWL2 714 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 PIK3R5Q8WYR1 880 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 NTPCRQ9BSD7 190 aaKnown RBP15.67■□□□□ 0.1
VTI1A-209ENST00000496445 TTPALQ9BTX7 342 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 RHOBTB2Q9BYZ6 727 aa15.67■□□□□ 0.1
VTI1A-209ENST00000496445 SMIM28A0A1B0GU29 152 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CCDC195A0A1B0GUA6 201 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 TMEM189-UBE2V1I3L0A0 370 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 C1RP00736 705 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 PDGFBP01127 241 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CLCNKBP51801 687 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 OSTNP61366 133 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CREMQ03060 361 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 ARSHQ5FYA8 562 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 FAM171A1Q5VUB5 890 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 MPZL3Q6UWV2 235 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 BRAPQ7Z569 592 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 APBB1IPQ7Z5R6 666 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 FBXL6Q8N531 539 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 C3orf58Q8NDZ4 430 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 HDAC7Q8WUI4 952 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CDK5RAP3Q96JB5 506 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 ZBTB45Q96K62 511 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 SNX27Q96L92 541 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 AK8Q96MA6 479 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 ZMAT2Q96NC0 199 aaKnown RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CLSTN3Q9BQT9 956 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 WDR6Q9NNW5 1121 aaKnown RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 DAXXQ9UER7 740 aaPredicted RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 LIMD1Q9UGP4 676 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 FBXW11Q9UKB1 542 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 RBM19Q9Y4C8 960 aaKnown RBP15.66■□□□□ 0.1
VTI1A-209ENST00000496445 CLUHO75153 1309 aa15.66■□□□□ 0.1
VTI1A-209ENST00000496445 PIEZO1Q92508 2521 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 ADAM12O43184 909 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 MCF2P10911 925 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 VCPP55072 806 aaKnown RBP15.65■□□□□ 0.1
VTI1A-209ENST00000496445 PSMD5Q16401 504 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 UPP1Q16831 310 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 IER5LQ5T953 404 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 OTOP3Q7RTS5 596 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 CEP57Q86XR8 500 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 UBALD2Q8IYN6 164 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 PLCD3Q8N3E9 789 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 PRSS33Q8NF86 280 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
VTI1A-209ENST00000496445 KCNH6Q9H252 994 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 PLEKHA4Q9H4M7 779 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 BLOC1S4Q9NUP1 217 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 KCND2Q9NZV8 630 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 DPP7Q9UHL4 492 aa15.65■□□□□ 0.1
VTI1A-209ENST00000496445 VPS37CA5D8V6 355 aaPredicted RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 SLC26A4O43511 780 aa15.64■□□□□ 0.09
VTI1A-209ENST00000496445 HARSP12081 509 aaKnown RBP15.64■□□□□ 0.09
VTI1A-209ENST00000496445 ANK1P16157 1881 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms