RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 MSRAQ9UJ68 235 aa16.3■□□□□ 0.2
GAPDH-210ENST00000496049 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
GAPDH-210ENST00000496049 USP20Q9Y2K6 914 aa16.3■□□□□ 0.2
GAPDH-210ENST00000496049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.3■□□□□ 0.2
GAPDH-210ENST00000496049 ZNF318Q5VUA4 2279 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 GOLGA8IPA6NC78 632 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 GOLGA8JA6NMD2 632 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 TTLL13PA6NNM8 815 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 PI4K2BG5E9Z4 385 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 STX10O60499 249 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 NPTXRO95502 500 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 CD52P31358 61 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 RFC2P35250 354 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 CASP4P49662 377 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 RAB27AP51159 221 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 FANCCQ00597 558 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 ENPEPQ07075 957 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 KRT31Q15323 416 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 DCAF17Q5H9S7 520 aaPredicted RBP16.29■□□□□ 0.2
GAPDH-210ENST00000496049 APBB2Q92870 758 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 ZBTB45Q96K62 511 aaPredicted RBP16.29■□□□□ 0.2
GAPDH-210ENST00000496049 FBXL18Q96ME1 805 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 CCDC94Q9BW85 323 aaPredicted RBP16.29■□□□□ 0.2
GAPDH-210ENST00000496049 FTHL17Q9BXU8 183 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 IFIH1Q9BYX4 1025 aaKnown RBP16.29■□□□□ 0.2
GAPDH-210ENST00000496049 PPP1R12CQ9BZL4 782 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 TRIM5Q9C035 493 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 ERVK-5Q9HDB9 667 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
GAPDH-210ENST00000496049 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 PADI3Q9ULW8 664 aa16.29■□□□□ 0.2
GAPDH-210ENST00000496049 CFAP54Q96N23 3096 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 ABLIM1O14639 778 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 TLL1O43897 1013 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 SKIP12755 728 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 YARSP54577 528 aaKnown RBP16.28■□□□□ 0.2
GAPDH-210ENST00000496049 UBASH3AP57075 661 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 POU5F1Q01860 360 aaKnown RBP16.28■□□□□ 0.2
GAPDH-210ENST00000496049 BFSP1Q12934 665 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 SURF1Q15526 300 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 FKBP15Q5T1M5 1219 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 EEF1DP3Q658K8 133 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 TRAF7Q6Q0C0 670 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 IRF2BP1Q8IU81 584 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 CBWD2Q8IUF1 395 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 THNSL1Q8IYQ7 743 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 RDH13Q8NBN7 331 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 SEPT8Q92599 483 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 FNBP1Q96RU3 617 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 SLC28A3Q9HAS3 691 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 TAB2Q9NYJ8 693 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
GAPDH-210ENST00000496049 TULP1O00294 542 aaPredicted RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 N4BP1O75113 896 aaKnown RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 IL18RAPO95256 599 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 CLTAP09496 248 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 GRM5P41594 1212 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 ACOT2P49753 483 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 VAMP7P51809 220 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 COPB1P53618 953 aaKnown RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 CYP24A1Q07973 514 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 RAB30Q15771 203 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 CDR2LQ86X02 465 aaPredicted RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 BRSK2Q8IWQ3 736 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 TRIM59Q8IWR1 403 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 HERVK_113Q902F9 699 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 AGO3Q9H9G7 860 aaKnown RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 CD320Q9NPF0 282 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 TOPORSQ9NS56 1045 aaPredicted RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
GAPDH-210ENST00000496049 YBX2Q9Y2T7 364 aaKnown RBP16.27■□□□□ 0.2
GAPDH-210ENST00000496049 LGALS16A8MUM7 142 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 PSMD6Q15008 389 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 TMC2Q8TDI7 906 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 HAPLN2Q9GZV7 340 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 VPS16Q9H269 839 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 C1orf112Q9NSG2 853 aa16.26■□□□□ 0.19
GAPDH-210ENST00000496049 RNF216Q9NWF9 866 aaPredicted RBP16.26■□□□□ 0.19
GAPDH-210ENST00000496049 CPSF3Q9UKF6 684 aaKnown RBP16.26■□□□□ 0.19
GAPDH-210ENST00000496049 FAM189A1O60320 539 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 TIMP1P01033 207 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 AFPP02771 609 aaKnown RBP16.25■□□□□ 0.19
GAPDH-210ENST00000496049 ADRB2P07550 413 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 STAG3L1P0CL83 205 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 ACRP10323 421 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 CYP2C18P33260 490 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 CCL23P55773 120 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 OSTNP61366 133 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 CETN1Q12798 172 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 MBTPS1Q14703 1052 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 C16orf59Q7L2K0 433 aa16.25■□□□□ 0.19
GAPDH-210ENST00000496049 CD302Q8IX05 232 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms