RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 FRMD5Q7Z6J6 570 aa16.26■□□□□ 0.19
PTPN18-216ENST00000495400 DTWD2Q8NBA8 298 aa16.26■□□□□ 0.19
PTPN18-216ENST00000495400 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
PTPN18-216ENST00000495400 ANHXE9PGG2 379 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 SEC24BO95487 1268 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 HNRNPA1P09651 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN18-216ENST00000495400 RFX1P22670 979 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 FSHRP23945 695 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 FXR2P51116 673 aaKnown RBP eCLIP16.25■□□□□ 0.19
PTPN18-216ENST00000495400 GNL2Q13823 731 aaKnown RBP16.25■□□□□ 0.19
PTPN18-216ENST00000495400 ANGPT1Q15389 498 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 ECM1Q16610 540 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 PPM1LQ5SGD2 360 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 LIN9Q5TKA1 542 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 ERICH6BQ5W0A0 696 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 FBXO18Q8NFZ0 1043 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 KIFAP3Q92845 792 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 CA14Q9ULX7 337 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 GDAQ9Y2T3 454 aa16.25■□□□□ 0.19
PTPN18-216ENST00000495400 RIF1Q5UIP0 2472 aaKnown RBP16.25■□□□□ 0.19
PTPN18-216ENST00000495400 FAM186AA6NE01 2351 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 HOXA9P31269 272 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 TRAPPC10P48553 1259 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 RBM25P49756 843 aaKnown RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 HMGN5P82970 282 aaKnown RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 HTR4Q13639 388 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 NT5DC1Q5TFE4 455 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 ATF7IP2Q5U623 682 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 APBB1IPQ7Z5R6 666 aaPredicted RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 GRASPQ7Z6J2 395 aaPredicted RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 NKD2Q969F2 451 aaPredicted RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 KIFC3Q9BVG8 833 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 BHMT2Q9H2M3 363 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 LRWD1Q9UFC0 647 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
PTPN18-216ENST00000495400 KIAA1024Q9UPX6 916 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 STK24Q9Y6E0 443 aa16.24■□□□□ 0.19
PTPN18-216ENST00000495400 MYH15Q9Y2K3 1946 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 TMEM189-UBE2V1I3L0A0 370 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 K7ERI5 159 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 XYLBO75191 536 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 C8AP07357 584 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 PDIA5Q14554 519 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 DCLRE1AQ6PJP8 1040 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 PPP1R10Q96QC0 940 aaKnown RBP16.23■□□□□ 0.19
PTPN18-216ENST00000495400 TBC1D17Q9HA65 648 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 SLC2A4RGQ9NR83 387 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 NUMBLQ9Y6R0 609 aa16.23■□□□□ 0.19
PTPN18-216ENST00000495400 CCL16O15467 120 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 ADAM12O43184 909 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 FGFR3P22607 806 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 OR1D2P34982 312 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 NTHL1P78549 312 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 RAB33AQ14088 237 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 GLRA4Q5JXX5 417 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 PHLDB3Q6NSJ2 640 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 UROC1Q96N76 676 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 DDX19AQ9NUU7 478 aaKnown RBP16.22■□□□□ 0.19
PTPN18-216ENST00000495400 MTRRQ9UBK8 725 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 CDH7Q9ULB5 785 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 POLIQ9UNA4 740 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 TNFSF13BQ9Y275 285 aa16.22■□□□□ 0.19
PTPN18-216ENST00000495400 NOTCH4Q99466 2003 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 B3GAT3O94766 335 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 POU2F2P09086 479 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 CLCNKBP51801 687 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 NBR1Q14596 966 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 AXDND1Q5T1B0 1012 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-216ENST00000495400 CD300LGQ6UXG3 332 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 IGSF22Q8N9C0 903 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 ST13P5Q8NFI4 369 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-216ENST00000495400 SLC7A14Q8TBB6 771 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 SNX29Q8TEQ0 813 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 FGF14Q92915 247 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 RPP25Q9BUL9 199 aaKnown RBP16.21■□□□□ 0.19
PTPN18-216ENST00000495400 ARHGEF3Q9NR81 526 aa16.21■□□□□ 0.19
PTPN18-216ENST00000495400 SH2B1Q9NRF2 756 aaPredicted RBP16.21■□□□□ 0.19
PTPN18-216ENST00000495400 CITO14578 2027 aa16.21■□□□□ 0.18
PTPN18-216ENST00000495400 SMIM28A0A1B0GU29 152 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 CCDC169A6NNP5 214 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 E9PMD0 336 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 TRAPPC3O43617 180 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 IGFBP6P24592 240 aaPredicted RBP16.2■□□□□ 0.18
PTPN18-216ENST00000495400 U2AF2P26368 475 aaKnown RBP eCLIP16.2■□□□□ 0.186e-7■■■□□ 19
PTPN18-216ENST00000495400 GRM5P41594 1212 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
PTPN18-216ENST00000495400 PEX3P56589 373 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 PTGDRQ13258 359 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 UPP1Q16831 310 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 PARM1Q6UWI2 310 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 MTSS1LQ765P7 747 aa16.2■□□□□ 0.18
PTPN18-216ENST00000495400 RTL10Q7L3V2 364 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms