RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TUFT1Q9NNX1 390 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 POLLQ9UGP5 575 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 TBK1Q9UHD2 729 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 PLSCR1O15162 318 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 SORBS3O60504 671 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 ADCY1Q08828 1119 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 ARHGEF18Q6ZSZ5 1173 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 FAM47EQ6ZV65 393 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 RELL1Q8IUW5 271 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 SLF2Q8IX21 1173 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 RDH13Q8NBN7 331 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 PARD3BQ8TEW8 1205 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 STK32AQ8WU08 396 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 MKL1Q969V6 931 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 RAB3IPQ96QF0 476 aaPredicted RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 KIAA1683Q9H0B3 1180 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 TXLNGQ9NUQ3 528 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 R3HDM2Q9Y2K5 976 aaKnown RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 ENO4A6NNW6 628 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 ERP27Q96DN0 273 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 SEL1LQ9UBV2 794 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 HAO1Q9UJM8 370 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
SDF4-207ENST00000494748 GRIN3BO60391 1043 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 PSMD10O75832 226 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 STRN3Q13033 797 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 SGO2Q562F6 1265 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 TEX9Q8N6V9 391 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 ASAP3Q8TDY4 903 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 TMEM174Q8WUU8 243 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 PITPNM3Q9BZ71 974 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 RGPD3A6NKT7 1758 aaPredicted RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 RGPD4Q7Z3J3 1758 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 ANKRD33BA6NCL7 494 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 E7ENQ6 273 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 SPOPO43791 374 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 TRIP13Q15645 432 aaPredicted RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 NSMFQ6X4W1 530 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 RGS9BPQ6ZS82 235 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 FAM178BQ8IXR5 827 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 INPP5DQ92835 1189 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 DCLK3Q9C098 648 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 YIPF3Q9GZM5 350 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 FGFR1P11362 822 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 ADSSP30520 456 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 HOXA13P31271 388 aaPredicted RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 TPH2Q8IWU9 490 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 AGGF1Q8N302 714 aaeCLIP16.39■□□□□ 0.21
SDF4-207ENST00000494748 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 SPDYE1Q8NFV5 336 aaPredicted RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 DCAF4Q8WV16 495 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
SDF4-207ENST00000494748 CYLDQ9NQC7 956 aa16.39■□□□□ 0.21
SDF4-207ENST00000494748 THAP12O43422 761 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 EXOC3O60645 756 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 CDH16O75309 829 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 ATP6V1C1P21283 382 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 RRM1P23921 792 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 FBF1Q8TES7 1133 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 C10orf82Q8WW14 230 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 DDX1Q92499 740 aaKnown RBP16.38■□□□□ 0.21
SDF4-207ENST00000494748 TBC1D10AQ9BXI6 508 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 SLCO1B3Q9NPD5 702 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 AHDC1Q5TGY3 1603 aaPredicted RBP16.38■□□□□ 0.21
SDF4-207ENST00000494748 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
SDF4-207ENST00000494748 FESP07332 822 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 ATP2B4P23634 1241 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 MCCD1P59942 119 aaPredicted RBP16.38■□□□□ 0.21
SDF4-207ENST00000494748 PPP2R5CQ13362 524 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 KIAA0825Q8IV33 1275 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 TRAIPQ9BWF2 469 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 TLE6Q9H808 572 aa16.38■□□□□ 0.21
SDF4-207ENST00000494748 SPATS2LQ9NUQ6 558 aaKnown RBP16.38■□□□□ 0.21
SDF4-207ENST00000494748 SPDYE5A6NIY4 337 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 SIGLEC16A6NMB1 481 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 TRAFD1O14545 582 aaPredicted RBP16.37■□□□□ 0.21
SDF4-207ENST00000494748 GNPATO15228 680 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 CYP26A1O43174 497 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 MUTP22033 750 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 GCLMP48507 274 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 MYBPC2Q14324 1141 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 USH1GQ495M9 461 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
SDF4-207ENST00000494748 PPP1R21Q6ZMI0 780 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 SYDE1Q6ZW31 735 aaPredicted RBP16.37■□□□□ 0.21
SDF4-207ENST00000494748 ZFPM1Q8IX07 1006 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 CEP120Q8N960 986 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 TTC8Q8TAM2 541 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 PHTF1Q9UMS5 762 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 DNAJC3Q13217 504 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 KLF1Q13351 362 aaPredicted RBP16.37■□□□□ 0.21
SDF4-207ENST00000494748 CCDC142Q17RM4 750 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 THEMIS2Q5TEJ8 643 aa16.37■□□□□ 0.21
SDF4-207ENST00000494748 TRABD2AQ86V40 505 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms