RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 COL4A2P08572 1712 aa12.3□□□□□ -0.44
TRIM59-206ENST00000494486 SF3B1O75533 1304 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRIM59-206ENST00000494486 HECTD1Q9ULT8 2610 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 ARL5CA6NH57 179 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 DHX15O43143 795 aaKnown RBP12.29□□□□□ -0.44
TRIM59-206ENST00000494486 VIPR2P41587 438 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 MAPK8P45983 427 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 FAM193AP78312 1265 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 CFHR1Q03591 330 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 SPIRE1Q08AE8 756 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 ZNF746Q6NUN9 644 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-206ENST00000494486 PKN3Q6P5Z2 889 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 NIPA1Q7RTP0 329 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 SMAP1Q8IYB5 467 aaPredicted RBP12.29□□□□□ -0.44
TRIM59-206ENST00000494486 HDDC3Q8N4P3 179 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 GAD1Q99259 594 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 MIOSQ9NXC5 875 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 GABBR1Q9UBS5 961 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 EBF1Q9UH73 591 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 PCDHA10Q9Y5I2 948 aa12.29□□□□□ -0.44
TRIM59-206ENST00000494486 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 HEPACAM2A8MVW5 462 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 ADAM12O43184 909 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 OATP04181 439 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 OR1D2P34982 312 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 SCNN1GP51170 649 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 MFAP1P55081 439 aaKnown RBP12.28□□□□□ -0.44
TRIM59-206ENST00000494486 TRIM61Q5EBN2 209 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 CEP57Q86XR8 500 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 TCEAL4Q96EI5 215 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 ZSWIM3Q96MP5 696 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 CORO1BQ9BR76 489 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 PCNX2A6NKB5 2137 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 ZNF462Q96JM2 2506 aa12.28□□□□□ -0.44
TRIM59-206ENST00000494486 WDR81Q562E7 1941 aa12.27□□□□□ -0.44
TRIM59-206ENST00000494486 LRG1P02750 347 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 ENGP17813 658 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 MLH1P40692 756 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 FCHO2Q0JRZ9 810 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 DRP2Q13474 957 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 CYP4A22Q5TCH4 519 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 FAM171A1Q5VUB5 890 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 PDZD4Q76G19 769 aaPredicted RBP12.27□□□□□ -0.45
TRIM59-206ENST00000494486 SMG8Q8ND04 991 aaKnown RBP12.27□□□□□ -0.45
TRIM59-206ENST00000494486 ZSCAN18Q8TBC5 510 aaPredicted RBP12.27□□□□□ -0.45
TRIM59-206ENST00000494486 PIGKQ92643 395 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 GPR88Q9GZN0 384 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 PRORYQ9H606 182 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 DCTPP1Q9H773 170 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 TBC1D22BQ9NU19 505 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 TCEAL9Q9UHQ7 104 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 NOTCH4Q99466 2003 aa12.27□□□□□ -0.45
TRIM59-206ENST00000494486 MYO18BQ8IUG5 2567 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ARHGEF37A1IGU5 675 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 IPO5O00410 1097 aaKnown RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 APBB3O95704 486 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 HOXA11P31270 313 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ZNF76P36508 570 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ATXN3P54252 364 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 HSP90AA2PQ14568 343 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 TRIP6Q15654 476 aaKnown RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 USP39Q53GS9 565 aaKnown RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 RHPN2Q8IUC4 686 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ZFP42Q96MM3 310 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 HHIPQ96QV1 700 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 TMEM209Q96SK2 561 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 GIT1Q9Y2X7 761 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 IPPQ9Y573 584 aa12.26□□□□□ -0.45
TRIM59-206ENST00000494486 USP9XQ93008 2570 aaPredicted RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 URB1O60287 2271 aaKnown RBP12.26□□□□□ -0.45
TRIM59-206ENST00000494486 ACACAQ13085 2346 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 SPTA1P02549 2419 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 IGKV6-21A0A0C4DH24 114 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 OPHN1O60890 802 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 WISP1O95388 367 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 FOSP01100 380 aaPredicted RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 FTH1P19P0C7X4 201 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 CCR2P41597 374 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 DPP6P42658 865 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 DHPSP49366 369 aaPredicted RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 CYP4F3Q08477 520 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 ELAVL2Q12926 359 aaKnown RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 PTPAQ15257 358 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 TARBP2Q15633 366 aaKnown RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 MAPK6Q16659 721 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 IMMTQ16891 758 aaKnown RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 TEX2Q8IWB9 1127 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 PIP4K2CQ8TBX8 421 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 RABGGTAQ92696 567 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
TRIM59-206ENST00000494486 SUCLA2Q9P2R7 463 aaPredicted RBP12.25□□□□□ -0.45
TRIM59-206ENST00000494486 APOBEC2Q9Y235 224 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms