RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ZNF703Q9H7S9 590 aaPredicted RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 AGO3Q9H9G7 860 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 TCF7L1Q9HCS4 588 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 KMT5AQ9NQR1 393 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ZIM2Q9NZV7 527 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 RNF181Q9P0P0 153 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF180Q9UJW8 692 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 INTUQ9ULD6 942 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 G3BP2Q9UN86 482 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 POLHQ9Y253 713 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ATP11BQ9Y2G3 1177 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ANKRD6Q9Y2G4 727 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 THRAP3Q9Y2W1 955 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 SH3BP1Q9Y3L3 701 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 NEU2Q9Y3R4 380 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 CFAP20Q9Y6A4 193 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 EID1Q9Y6B2 187 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ARID4BQ4LE39 1312 aaPredicted RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 TMEM191CA6NGB0 347 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 RNASET2O00584 256 aaKnown RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ORC4O43929 436 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ZRANB2O95218 330 aaKnown RBP eCLIP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 POMCP01189 267 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 AMHP03971 560 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 PF4V1P10720 104 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 MTHFD1P11586 935 aaKnown RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 INSRRP14616 1297 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 TACR2P21452 398 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 BUD31P41223 144 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 AVPR1BP47901 424 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CDC42EP1Q00587 391 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 TUBA3CQ13748 450 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 RRP1BQ14684 758 aaKnown RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 PPP2R5AQ15172 486 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 VPS72Q15906 364 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CCDC157Q569K6 752 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ATXN7L2Q5T6C5 722 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 TUBA3EQ6PEY2 450 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 Q6ZVL8 140 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF572Q7Z3I7 529 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 TTC7BQ86TV6 843 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 RHOT1Q8IXI2 618 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ELOA2Q8IYF1 753 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 MDM1Q8TC05 714 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF483Q8TF39 744 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 SLC25A43Q8WUT9 341 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 JPH3Q8WXH2 748 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 HOXB13Q92826 284 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 COA7Q96BR5 231 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CCDC136Q96JN2 1154 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 FAM167AQ96KS9 214 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 C8orf48Q96LL4 319 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CAMKK2Q96RR4 588 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 MNTQ99583 582 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 SLC46A2Q9BY10 475 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 RHOBTB2Q9BYZ6 727 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CDH19Q9H159 772 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 RNPEPQ9H4A4 650 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CNNM1Q9NRU3 951 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 SLC52A1Q9NWF4 448 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 TRPS1Q9UHF7 1281 aa3.06□□□□□ -1.92
LMNB1-207ENST00000494185 PNMA8BQ9ULN7 279 aaPredicted RBP3.06□□□□□ -1.92
LMNB1-207ENST00000494185 CCDC154A6NI56 674 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 TBKBP1A7MCY6 615 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 CYR61O00622 381 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 ADCY6O43306 1168 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 HTRA2O43464 458 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 RFPL1O75677 317 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 RHOBTB3O94955 611 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 SCAF4O95104 1147 aaKnown RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF202O95125 648 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 FTH1P19P0C7X4 201 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 LAG3P18627 525 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 HK1P19367 917 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 AKAP5P24588 427 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 SMARCA1P28370 1054 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 SREBF1P36956 1147 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 TBX4P57082 545 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 FOXE3Q13461 319 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 SEPT2Q15019 361 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 PTPAQ15257 358 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 NFE2Q16621 373 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 ERCC6LQ2NKX8 1250 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 LSM12Q3MHD2 195 aaKnown RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 TIGD2Q4W5G0 525 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 RABL3Q5HYI8 236 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 MIIPQ5JXC2 388 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 LY6G5CQ5SRR4 150 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 PRAMEF14Q5SWL7 426 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 CCSAPQ6IQ19 270 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 HTR3DQ70Z44 454 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 FMNL3Q8IVF7 1028 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 CCAR1Q8IX12 1150 aaKnown RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 RAVER1Q8IY67 606 aaKnown RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 TRMT2AQ8IZ69 625 aaKnown RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 LILRA3Q8N6C8 439 aaPredicted RBP3.05□□□□□ -1.92
LMNB1-207ENST00000494185 OR10H5Q8NGA6 315 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 OR52N2Q8NGI0 321 aa3.05□□□□□ -1.92
LMNB1-207ENST00000494185 OR2I1PQ8NGU4 316 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms