RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 ANKRD36BP1Q96IX9 119 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 SNX27Q96L92 541 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 TMEM117Q9H0C3 514 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 C2CD2Q9Y426 696 aa16.19■□□□□ 0.18
ACTB-213ENST00000493945 TNNC2P02585 160 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 TNNI1P19237 187 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 VAMP7P51809 220 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 CYP24A1Q07973 514 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 BFSP1Q12934 665 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 TMEM132DQ14C87 1099 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 PSMD6Q15008 389 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 TCERG1LQ5VWI1 586 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 ZNF598Q86UK7 904 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 CBWD2Q8IUF1 395 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 WDR49Q8IV35 697 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 CCDC150Q8NCX0 1101 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 BEST2Q8NFU1 509 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 CNOT6LQ96LI5 555 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 YME1L1Q96TA2 773 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 DUSP9Q99956 384 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 OSBPL7Q9BZF2 842 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 CNTN3Q9P232 1028 aa16.18■□□□□ 0.18
ACTB-213ENST00000493945 UBQLN1Q9UMX0 589 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 PDCD11Q14690 1871 aaKnown RBP16.18■□□□□ 0.18
ACTB-213ENST00000493945 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 H0YGN5 161 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 AKAP3O75969 853 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 THP07101 528 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 DLATP10515 647 aaKnown RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 ATP2A2P16615 1042 aaKnown RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 AKAP5P24588 427 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 BMP8BP34820 402 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 MLH1P40692 756 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 MARSP56192 900 aaKnown RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 ENOX2Q16206 610 aaKnown RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 FILIP1LQ4L180 1135 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 DCAF17Q5H9S7 520 aaPredicted RBP16.17■□□□□ 0.18
ACTB-213ENST00000493945 NOMO2Q5JPE7 1267 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 CEP120Q8N960 986 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 KIF12Q96FN5 646 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 MFSD14AQ96MC6 490 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 CBX8Q9HC52 389 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 INPP5FQ9Y2H2 1132 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 HES2Q9Y543 173 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.17■□□□□ 0.18
ACTB-213ENST00000493945 CEP290O15078 2479 aa16.17■□□□□ 0.18
ACTB-213ENST00000493945 MKI67P46013 3256 aaKnown RBP16.16■□□□□ 0.18
ACTB-213ENST00000493945 TTC26A0AVF1 554 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 ARL5CA6NH57 179 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 KCNJ18B7U540 433 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 INPPL1O15357 1258 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 FAM189A1O60320 539 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 UPP2O95045 317 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 KCNE1P15382 129 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 PAX3P23760 479 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 GTF2H1P32780 548 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 TNFSF9P41273 254 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 KCNJ12Q14500 433 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 DUOXA2Q1HG44 320 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 RTN4RL1Q86UN2 441 aaPredicted RBP16.16■□□□□ 0.18
ACTB-213ENST00000493945 CMTR2Q8IYT2 770 aaKnown RBP16.16■□□□□ 0.18
ACTB-213ENST00000493945 HELQQ8TDG4 1101 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 CCDC127Q96BQ5 260 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 UROC1Q96N76 676 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 GAD1Q99259 594 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 GDF15Q99988 308 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 IMPG2Q9BZV3 1241 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 HAPLN2Q9GZV7 340 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 AAASQ9NRG9 546 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 RWDD3Q9Y3V2 267 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 INSL6Q9Y581 213 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 ANK1P16157 1881 aa16.16■□□□□ 0.18
ACTB-213ENST00000493945 TRIP11Q15643 1979 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 TBKBP1A7MCY6 615 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 PES1O00541 588 aaKnown RBP16.15■□□□□ 0.18
ACTB-213ENST00000493945 PHACTR2O75167 634 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 CLSTN1O94985 981 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 GJB5O95377 273 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
ACTB-213ENST00000493945 CYP3A5P20815 502 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 CASP4P49662 377 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 MAN2A1Q16706 1144 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 SLC10A6Q3KNW5 377 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 SEZ6Q53EL9 994 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 FKBP15Q5T1M5 1219 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.15■□□□□ 0.182e-30■■■□□ 14.8
ACTB-213ENST00000493945 AGMOQ6ZNB7 445 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 LPPQ93052 612 aa16.15■□□□□ 0.18
ACTB-213ENST00000493945 FNDC1Q4ZHG4 1894 aaPredicted RBP16.14■□□□□ 0.17
ACTB-213ENST00000493945 ARHGEF37A1IGU5 675 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 LACTBL1A8MY62 500 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 TLL1O43897 1013 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 ADRB2P07550 413 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 MXI1P50539 228 aa16.14■□□□□ 0.17
ACTB-213ENST00000493945 DEFB103AP81534 67 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms