RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SPIRE2Q8WWL2 714 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 RAD54LQ92698 747 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 ADPGKQ9BRR6 497 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 NT5C3AQ9H0P0 336 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
HSPG2-212ENST00000493940 ZDBF2Q9HCK1 2354 aa13.85□□□□□ -0.19
HSPG2-212ENST00000493940 SMIM28A0A1B0GU29 152 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 GRM5P41594 1212 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 GLUD2P49448 558 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 MRE11P49959 708 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 CLCNKBP51801 687 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 NCKAP1LP55160 1127 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 NHLH1Q02575 133 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 DCAF4L1Q3SXM0 396 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 ZNF568Q3ZCX4 644 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 HERC4Q5GLZ8 1057 aaPredicted RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 LILRA6Q6PI73 481 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 PALB2Q86YC2 1186 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 HACE1Q8IYU2 909 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 SNX21Q969T3 373 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 CDK5RAP3Q96JB5 506 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 MRPL4Q9BYD3 311 aaKnown RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 CCSER1Q9C0I3 900 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 SMOC2Q9H3U7 446 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 TFIP11Q9UBB9 837 aaKnown RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 SRPRBQ9Y5M8 271 aaKnown RBP13.84□□□□□ -0.19
HSPG2-212ENST00000493940 KMT2EQ8IZD2 1858 aa13.84□□□□□ -0.19
HSPG2-212ENST00000493940 C2CD4DB7Z1M9 353 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 I3L4J1 428 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 STX6O43752 255 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 TADA2AO75478 443 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 RFPL2O75678 378 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 BRD1O95696 1058 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 HARSP12081 509 aaKnown RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 PDCP20941 246 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 NMT1P30419 496 aaKnown RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 ZNF131P52739 623 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 PKP1Q13835 747 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 SLC10A6Q3KNW5 377 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 ZBTB41Q5SVQ8 909 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 FOXD4L5Q5VV16 416 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 SLC39A4Q6P5W5 647 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 MPZL3Q6UWV2 235 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 RSPO2Q6UXX9 243 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 HAUS6Q7Z4H7 955 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 LNX1Q8TBB1 728 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 FOXD4L4Q8WXT5 416 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 RIN2Q8WYP3 895 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 C18orf25Q96B23 403 aaPredicted RBP13.83□□□□□ -0.2
HSPG2-212ENST00000493940 CLSTN3Q9BQT9 956 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 TIPINQ9BVW5 301 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
HSPG2-212ENST00000493940 FSD2A1L4K1 749 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 CARNS1A5YM72 827 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 TISP43B9A030 160 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 ANKRD63C9JTQ0 380 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 TGM5O43548 720 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 FAM189A1O60320 539 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 N4BP1O75113 896 aaKnown RBP13.82□□□□□ -0.2
HSPG2-212ENST00000493940 URODP06132 367 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 DDIT3P35638 169 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 TNFSF9P41273 254 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 BRCC3P46736 316 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 ITIH3Q06033 890 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 SPAG1Q07617 926 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 UPP1Q16831 310 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 USP41Q3LFD5 358 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 TPRNQ4KMQ1 711 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 ZC2HC1CQ53FD0 456 aaPredicted RBP13.82□□□□□ -0.2
HSPG2-212ENST00000493940 FAM171A1Q5VUB5 890 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 KIAA1841Q6NSI8 718 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 HFE2Q6ZVN8 426 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 GPR149Q86SP6 731 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 KCTD17Q8N5Z5 321 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 SPRYD3Q8NCJ5 442 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 CALML4Q96GE6 196 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 SNX27Q96L92 541 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 POP1Q99575 1024 aaKnown RBP13.82□□□□□ -0.2
HSPG2-212ENST00000493940 EMILIN2Q9BXX0 1053 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 MAN1C1Q9NR34 630 aa13.82□□□□□ -0.2
HSPG2-212ENST00000493940 MYMKA6NI61 221 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 SLC26A4O43511 780 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 BMP15O95972 392 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 SRGAP2BP0DMP2 458 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 MCF2P10911 925 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 BMS1Q14692 1282 aaKnown RBP13.81□□□□□ -0.2
HSPG2-212ENST00000493940 DYMQ7RTS9 669 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 CEP57Q86XR8 500 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 MYCT1Q8N699 235 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 LARP4BQ92615 738 aaKnown RBP13.81□□□□□ -0.2
HSPG2-212ENST00000493940 EDAQ92838 391 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 KCNN1Q92952 543 aa13.81□□□□□ -0.2
HSPG2-212ENST00000493940 ZNF707Q96C28 371 aaPredicted RBP13.81□□□□□ -0.2
HSPG2-212ENST00000493940 DNAJC19Q96DA6 116 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms