RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 LRRC39Q96DD0 335 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 DHX35Q9H5Z1 703 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 KRT84Q9NSB2 600 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 GTF2A1LQ9UNN4 478 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SNPHO15079 494 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SYNCRIPO60506 623 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 MYL2P10916 166 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SERPINB9P50453 376 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 MRPS35P82673 323 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 KRT76Q01546 638 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ALDH6A1Q02252 535 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 NCF4Q15080 339 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 INAQ16352 499 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 UGP2Q16851 508 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 SYDE1Q6ZW31 735 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 DDX53Q86TM3 631 aaKnown RBP8.27□□□□□ -1.09
BRCA1-221ENST00000493795 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 MAN1C1Q9NR34 630 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 ARHGEF38Q9NXL2 777 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 CD274Q9NZQ7 290 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 FAM135BQ49AJ0 1406 aa8.27□□□□□ -1.09
BRCA1-221ENST00000493795 TCP11X1B4DZS4 312 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SRGAP2O75044 1071 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CAPN1P07384 714 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 AKT1P31749 480 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ANXA11P50995 505 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 RSBN1Q5VWQ0 802 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 BTBD8Q5XKL5 378 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ARMC6Q6NXE6 501 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CCDC137Q6PK04 289 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 MYLK2Q9H1R3 596 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 MRPL39Q9NYK5 338 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 HSPBP1Q9NZL4 362 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ARIH1Q9Y4X5 557 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SNAPC4Q5SXM2 1469 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 F8W810 466 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 AGTP01019 485 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SLC16A2P36021 539 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 RPS7P62081 194 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 NFX1Q12986 1120 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ADRM1Q16186 407 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ARMC3Q5W041 872 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 TRIM72Q6ZMU5 477 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 NEK10Q6ZWH5 1172 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PID1Q7Z2X4 250 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 GSPT2Q8IYD1 628 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 GLMNQ92990 594 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CNKSR1Q969H4 720 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 IL17RAQ96F46 866 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 EDC3Q96F86 508 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 EPS8L2Q9H6S3 715 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PDP2Q9P2J9 529 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 HDAC6Q9UBN7 1215 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 TJP2Q9UDY2 1190 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PIK3C2GO75747 1445 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 BLMP54132 1417 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PARD3Q8TEW0 1356 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 UBTFL6P0CB48 400 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 GNA15P30679 374 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 RRM2P31350 389 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 HSD17B4P51659 736 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 BTKQ06187 659 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PWP1Q13610 501 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ZNF568Q3ZCX4 644 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 EEPD1Q7L9B9 569 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 IFNEQ86WN2 208 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PROM2Q8N271 834 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PGBD4Q96DM1 585 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CNDP1Q96KN2 507 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SERHL2Q9H4I8 314 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PLEKHA5Q9HAU0 1116 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 IARS2Q9NSE4 1012 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CFAP99D6REC4 459 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ARSEP51690 589 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ATP12AP54707 1039 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ST8SIA6P61647 398 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PURAQ00577 322 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CHRNDQ07001 517 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SMAD1Q15797 465 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 MAPK6Q16659 721 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PHKG1Q16816 387 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 SMAD5Q99717 465 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PDCD10Q9BUL8 212 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 ALG13Q9NP73 1137 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 NPHS2Q9NP85 383 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PALD1Q9ULE6 856 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CDK13Q14004 1512 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 DNALI1O14645 258 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 PRPF3O43395 683 aaKnown RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CYP19A1P11511 503 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 GFPT1Q06210 699 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-221ENST00000493795 CNTN1Q12860 1018 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 LRRC24Q50LG9 513 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 IKBIPQ70UQ0 350 aa8.26□□□□□ -1.09
BRCA1-221ENST00000493795 MCPH1Q8NEM0 835 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms