RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TARS2Q9BW92 718 aaKnown RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 CDT1Q9H211 546 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 KCNH6Q9H252 994 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 GOLGA2P5Q9HBQ8 144 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 FNIP2Q9P278 1114 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 N4BP1O75113 896 aaKnown RBP16.09■□□□□ 0.17
ATG4B-223ENST00000493618 HARSP12081 509 aaKnown RBP16.09■□□□□ 0.17
ATG4B-223ENST00000493618 GBP2P32456 591 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-223ENST00000493618 CLCNKBP51801 687 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
ATG4B-223ENST00000493618 PSMD5Q16401 504 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 ZNF568Q3ZCX4 644 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 ELMSAN1Q6PJG2 1045 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 DRC1Q96MC2 740 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 TTPALQ9BTX7 342 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 PIDD1Q9HB75 910 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 CLUHO75153 1309 aa16.09■□□□□ 0.17
ATG4B-223ENST00000493618 MYH15Q9Y2K3 1946 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 I3L4J1 428 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 ADAM12O43184 909 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 AVPR2P30518 371 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 LILRA6Q6PI73 481 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 APBB1IPQ7Z5R6 666 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 LNX1Q8TBB1 728 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 ZBTB45Q96K62 511 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 TBC1D32Q96NH3 1257 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 PPP1R10Q96QC0 940 aaKnown RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 PHOX2BQ99453 314 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 TMEM134Q9H6X4 195 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 WDR6Q9NNW5 1121 aaKnown RBP16.08■□□□□ 0.16
ATG4B-223ENST00000493618 ARHGAP28Q9P2N2 729 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 DPP7Q9UHL4 492 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 ANK1P16157 1881 aa16.08■□□□□ 0.16
ATG4B-223ENST00000493618 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 GRM5P41594 1212 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
ATG4B-223ENST00000493618 CREMQ03060 361 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 SOX4Q06945 474 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-223ENST00000493618 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 HYIQ5T013 277 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 C3orf58Q8NDZ4 430 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 ST13P5Q8NFI4 369 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-223ENST00000493618 HDAC7Q8WUI4 952 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 RSAD2Q8WXG1 361 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 PIK3R5Q8WYR1 880 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 MYADMQ96S97 322 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 TCHPQ9BT92 498 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 CCDC94Q9BW85 323 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-223ENST00000493618 PLEKHA4Q9H4M7 779 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 PTPRHQ9HD43 1115 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 PIEZO1Q92508 2521 aa16.07■□□□□ 0.16
ATG4B-223ENST00000493618 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 SMIM28A0A1B0GU29 152 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 NARSO43776 548 aaKnown RBP16.06■□□□□ 0.16
ATG4B-223ENST00000493618 B3GAT3O94766 335 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 BRCC3P46736 316 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 MCM2P49736 904 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 MRE11P49959 708 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 SLC12A3P55017 1021 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 TCF15Q12870 199 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 DHX8Q14562 1220 aaKnown RBP16.06■□□□□ 0.16
ATG4B-223ENST00000493618 CD300LGQ6UXG3 332 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 GET4Q7L5D6 327 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-223ENST00000493618 GPR65Q8IYL9 337 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 SYT2Q8N9I0 419 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-223ENST00000493618 PRKD2Q9BZL6 878 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 KCNK12Q9HB15 430 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 ANKFY1Q9P2R3 1169 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 FBXW11Q9UKB1 542 aa16.06■□□□□ 0.16
ATG4B-223ENST00000493618 ABLIM1O14639 778 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 CCL16O15467 120 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 ZMYND10O75800 440 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 MCF2P10911 925 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 PLS3P13797 630 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 PROZP22891 400 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
ATG4B-223ENST00000493618 PTPN5P54829 565 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 NTHL1P78549 312 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 GRIN1Q05586 938 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 ELAVL2Q12926 359 aaKnown RBP16.05■□□□□ 0.16
ATG4B-223ENST00000493618 STRN3Q13033 797 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 TDGQ13569 410 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 UPP1Q16831 310 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 TMEM119Q4V9L6 283 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 DCLRE1AQ6PJP8 1040 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 MPZL3Q6UWV2 235 aa16.05■□□□□ 0.16
ATG4B-223ENST00000493618 RSPO2Q6UXX9 243 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-223ENST00000493618 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-223ENST00000493618 TMEM130Q8N3G9 435 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms