RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ADAM15Q13444 863 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 PNOCQ13519 176 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 KMT5BQ4FZB7 885 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 SPOUT1Q5T280 376 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 L1TD1Q5T7N2 865 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 AGMOQ6ZNB7 445 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 MRPL10Q7Z7H8 261 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 SYCP3Q8IZU3 236 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 GLIS3Q8NEA6 775 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 URGCPQ8TCY9 931 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 KCNN1Q92952 543 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 ZBTB45Q96K62 511 aaPredicted RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 TIGD1Q96MW7 591 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 ACCSQ96QU6 501 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 MRPL9Q9BYD2 267 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 PARP2Q9UGN5 583 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 HOOK1Q9UJC3 728 aaKnown RBP12.67□□□□□ -0.38
CTSA-209ENST00000493522 EXOC7Q9UPT5 735 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 GDAQ9Y2T3 454 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 PCDHB13Q9Y5F0 798 aa12.67□□□□□ -0.38
CTSA-209ENST00000493522 UBE4BO95155 1302 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 RECQL4O94761 1208 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 PIGRP01833 764 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 ITGB1P05556 798 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 MCF2P10911 925 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 PROZP22891 400 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 AKAP5P24588 427 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 MLH1P40692 756 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 OSTNP61366 133 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 EHHADHQ08426 723 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 DPYDQ12882 1025 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 CAMK1Q14012 370 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 EFHBQ8N7U6 833 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 CEP120Q8N960 986 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 CASD1Q96PB1 797 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 GAD1Q99259 594 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 CCDC94Q9BW85 323 aaPredicted RBP12.66□□□□□ -0.38
CTSA-209ENST00000493522 PTPRHQ9HD43 1115 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 SLC39A2Q9NP94 309 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 SNTG2Q9NY99 539 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 KLK14Q9P0G3 267 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 HCSTQ9UBK5 93 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 ZMYM2Q9UBW7 1377 aa12.66□□□□□ -0.38
CTSA-209ENST00000493522 ZNF318Q5VUA4 2279 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 TISP43B9A030 160 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 ABLIM1O14639 778 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 EIF3DO15371 548 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTSA-209ENST00000493522 CLDN3O15551 220 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 GRM5P41594 1212 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 RNASELQ05823 741 aaKnown RBP12.65□□□□□ -0.38
CTSA-209ENST00000493522 KCNA1Q09470 495 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 NOMO2Q5JPE7 1267 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 SLC39A4Q6P5W5 647 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 KLHL23Q8NBE8 558 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 SMRP1Q8NCR6 262 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 SPPL3Q8TCT6 385 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 POF1BQ8WVV4 589 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 EDAQ92838 391 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 MSTO1Q9BUK6 570 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 STRA6Q9BX79 667 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 IKZF4Q9H2S9 585 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 UBN1Q9NPG3 1134 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 TBC1D13Q9NVG8 400 aa12.65□□□□□ -0.38
CTSA-209ENST00000493522 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 ARL5CA6NH57 179 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 ANKRD63C9JTQ0 380 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 OFD1O75665 1012 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 SMC2O95347 1197 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 POMCP01189 267 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 DNAJB1P25685 340 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 NRIP1P48552 1158 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 SCNN1GP51170 649 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 YARSP54577 528 aaKnown RBP12.64□□□□□ -0.39
CTSA-209ENST00000493522 MCL1Q07820 350 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 PSMD2Q13200 908 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 EPM2AIP1Q7L775 607 aaPredicted RBP12.64□□□□□ -0.39
CTSA-209ENST00000493522 ADGRD2Q7Z7M1 963 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 NELFCDQ8IXH7 590 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 KIAA0895Q8NCT3 520 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 RSPH1Q8WYR4 309 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 POMGNT1Q8WZA1 660 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 ERCC4Q92889 916 aaPredicted RBP12.64□□□□□ -0.39
CTSA-209ENST00000493522 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 HAPLN2Q9GZV7 340 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 GBP3Q9H0R5 595 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 TMEM206Q9H813 350 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 LMBRD1Q9NUN5 540 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 TYW1Q9NV66 732 aaKnown RBP12.64□□□□□ -0.39
CTSA-209ENST00000493522 CLEC1BQ9P126 229 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 GIT1Q9Y2X7 761 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
CTSA-209ENST00000493522 MYO15AQ9UKN7 3530 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 OGTO15294 1046 aa12.63□□□□□ -0.39
CTSA-209ENST00000493522 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms