RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 KANSL1LA0AUZ9 987 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 TTLL13PA6NNM8 815 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 CCL16O15467 120 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 NAB2Q15742 525 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 CDCA2Q69YH5 1023 aaPredicted RBP23.74■■□□□ 1.39
PFDN4-205ENST00000493356 MAEAQ7L5Y9 396 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 DCLK2Q8N568 766 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 SUMF1Q8NBK3 374 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 ITFG1Q8TB96 612 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 CXCL16Q9H2A7 254 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 FZD8Q9H461 694 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 PDZD7Q9H5P4 517 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 SNTG2Q9NY99 539 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 POLIQ9UNA4 740 aa23.74■■□□□ 1.39
PFDN4-205ENST00000493356 XYLBO75191 536 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 RECQL4O94761 1208 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 THP07101 528 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 XRCC6P12956 609 aaKnown RBP eCLIP23.73■■□□□ 1.39
PFDN4-205ENST00000493356 TXKP42681 527 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 PUM1Q14671 1186 aaKnown RBP eCLIP23.73■■□□□ 1.392e-6■■□□□ 13.4
PFDN4-205ENST00000493356 MLF2Q15773 248 aaPredicted RBP23.73■■□□□ 1.39
PFDN4-205ENST00000493356 FAM187BQ17R55 369 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 SLC7A14Q8TBB6 771 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 WASF1Q92558 559 aa23.73■■□□□ 1.39
PFDN4-205ENST00000493356 WNT7AO00755 349 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 N4BP3O15049 544 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 KINO60870 393 aaKnown RBP23.72■■□□□ 1.39
PFDN4-205ENST00000493356 PRKCQQ04759 706 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 ELAVL2Q12926 359 aaKnown RBP23.72■■□□□ 1.39
PFDN4-205ENST00000493356 SLC44A4Q53GD3 710 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 PDXDC1Q6P996 788 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 ZBTB8OSQ8IWT0 167 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 BCO2Q9BYV7 579 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 BRMS1Q9HCU9 246 aa23.72■■□□□ 1.39
PFDN4-205ENST00000493356 SPATA6Q9NWH7 488 aaPredicted RBP23.72■■□□□ 1.39
PFDN4-205ENST00000493356 MTF2Q9Y483 593 aaPredicted RBP23.72■■□□□ 1.39
PFDN4-205ENST00000493356 NEMFO60524 1076 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 POU2F2P09086 479 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 FDPSP14324 419 aaKnown RBP23.71■■□□□ 1.39
PFDN4-205ENST00000493356 RAB33AQ14088 237 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 UBXN2BQ14CS0 331 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 ZNF528Q3MIS6 628 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 AXDND1Q5T1B0 1012 aaPredicted RBP23.71■■□□□ 1.39
PFDN4-205ENST00000493356 MCPH1Q8NEM0 835 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 MTMR9Q96QG7 549 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 OSBPL6Q9BZF3 934 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 HCFC1R1Q9NWW0 138 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 DLL3Q9NYJ7 618 aa23.71■■□□□ 1.39
PFDN4-205ENST00000493356 LAMTOR5O43504 91 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 SPATA31C1P0DKV0 1188 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 OR1D2P34982 312 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 PFKPQ01813 784 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.7■■□□□ 1.38
PFDN4-205ENST00000493356 NOSTRINQ8IVI9 506 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 NPAS3Q8IXF0 933 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 KXD1Q9BQD3 176 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 FBXO4Q9UKT5 387 aa23.7■■□□□ 1.38
PFDN4-205ENST00000493356 FAM170BA6NMN3 283 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 ATP2B1P20020 1258 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 PRPF4BQ13523 1007 aaKnown RBP23.69■■□□□ 1.38
PFDN4-205ENST00000493356 TMEM132AQ24JP5 1023 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 UVSSAQ2YD98 709 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 PABPC1LQ4VXU2 614 aaKnown RBP23.69■■□□□ 1.38
PFDN4-205ENST00000493356 RSPO2Q6UXX9 243 aaPredicted RBP23.69■■□□□ 1.38
PFDN4-205ENST00000493356 BSNDQ8WZ55 320 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 C2orf40Q9H1Z8 148 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 LTB4R2Q9NPC1 389 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 DNMT3BQ9UBC3 853 aaKnown RBP23.69■■□□□ 1.38
PFDN4-205ENST00000493356 MTRRQ9UBK8 725 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 KCNH3Q9ULD8 1083 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 USP20Q9Y2K6 914 aa23.69■■□□□ 1.38
PFDN4-205ENST00000493356 BTBD18B2RXH4 712 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 EDN1P05305 212 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 PRKCBP05771 671 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 CD72P21854 359 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 FGFR3P22607 806 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 MAPK6Q16659 721 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 CATSPER3Q86XQ3 398 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 BORCS6Q96GS4 357 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 ADPGKQ9BRR6 497 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 CCDC113Q9H0I3 377 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 TRIP11Q15643 1979 aa23.68■■□□□ 1.38
PFDN4-205ENST00000493356 TMEM189-UBE2V1I3L0A0 370 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 ACKR2O00590 384 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 SPTLC1O15269 473 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 IGFBP6P24592 240 aaPredicted RBP23.67■■□□□ 1.38
PFDN4-205ENST00000493356 EEF1DP3Q658K8 133 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 RTL10Q7L3V2 364 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 ING5Q8WYH8 240 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 TMEM60Q9H2L4 133 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 TUFT1Q9NNX1 390 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 GDAQ9Y2T3 454 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 CDY1Q9Y6F8 540 aa23.67■■□□□ 1.38
PFDN4-205ENST00000493356 MED24O75448 989 aa23.66■■□□□ 1.38
PFDN4-205ENST00000493356 MAGEA9P43362 315 aa23.66■■□□□ 1.38
PFDN4-205ENST00000493356 RBM25P49756 843 aaKnown RBP23.66■■□□□ 1.38
PFDN4-205ENST00000493356 CSTF1Q05048 431 aaKnown RBP23.66■■□□□ 1.38
PFDN4-205ENST00000493356 DIS3L2Q8IYB7 885 aaKnown RBP23.66■■□□□ 1.38
PFDN4-205ENST00000493356 MRPS23Q9Y3D9 190 aaKnown RBP23.66■■□□□ 1.38
PFDN4-205ENST00000493356 PCDHGA2Q9Y5H1 932 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms