RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TUSC3Q13454 348 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 GRIN2CQ14957 1233 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 SURF1Q15526 300 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 TIGD5Q53EQ6 642 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 KIAA1841Q6NSI8 718 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CLEC17AQ6ZS10 378 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 TMC7Q7Z402 723 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 USP37Q86T82 979 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 ELOA2Q8IYF1 753 aaPredicted RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CRIPAKQ8N1N5 446 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 GPD1LQ8N335 351 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 KLHL23Q8NBE8 558 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 ENGASEQ8NFI3 743 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 BEST2Q8NFU1 509 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF507Q8TCN5 953 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CACTINQ8WUQ7 758 aaKnown RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 MYLIPQ8WY64 445 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 KIF12Q96FN5 646 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 UROC1Q96N76 676 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 FNBP1Q96RU3 617 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 TSPAN18Q96SJ8 248 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 FIZ1Q96SL8 496 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CDX2Q99626 313 aaPredicted RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 FAM213AQ9BRX8 229 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 NUP62CLQ9H1M0 184 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 PCIF1Q9H4Z3 704 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 CWH43Q9H720 699 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 NRDE2Q9H7Z3 1164 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 PTPRHQ9HD43 1115 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 MTMR10Q9NXD2 777 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 LMCD1Q9NZU5 365 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 FRMD4BQ9Y2L6 1034 aa8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 PRG3Q9Y2Y8 225 aaPredicted RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 COL4A4P53420 1690 aaPredicted RBP8.85□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF233A6NK53 670 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 NT5C1B-RDH14C9J2C7 533 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 ANKRD63C9JTQ0 380 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 C5orf67F2Z3F1 127 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 RBAK-RBAKDNI3L0D1 243 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 TRAPPC3O43617 180 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 KLRC4O43908 158 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 EXTL3O43909 919 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 EXOC3O60645 756 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 PPP1R37O75864 691 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 CXCL8P10145 99 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 RPL13P26373 211 aaKnown RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 ACOT2P49753 483 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 STK4Q13043 487 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 CAMK4Q16566 473 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SEZ6Q53EL9 994 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 GLRA4Q5JXX5 417 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF658Q5TYW1 1059 aaPredicted RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 PDE12Q6L8Q7 609 aaKnown RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 CEP120Q8N960 986 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 XXYLT1Q8NBI6 393 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 PPM1EQ8WY54 764 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SYAP1Q96A49 352 aaPredicted RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SAAL1Q96ER3 474 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SNX27Q96L92 541 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 STRA6Q9BX79 667 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 PLXNA4Q9HCM2 1894 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 ALG13Q9NP73 1137 aaKnown RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 TLR9Q9NR96 1032 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 RNF19AQ9NV58 838 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 RBAKQ9NYW8 714 aaPredicted RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 HSPBP1Q9NZL4 362 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 UBQLN1Q9UMX0 589 aaKnown RBP8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SSX2IPQ9Y2D8 614 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 NUB1Q9Y5A7 615 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 PCDHA5Q9Y5H7 936 aa8.84□□□□□ -0.99
TM4SF1-204ENST00000493348 SMIM28A0A1B0GU29 152 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 ARHGEF37A1IGU5 675 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 FSD2A1L4K1 749 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 GOLGA8IPA6NC78 632 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 CASTOR2A6NHX0 329 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 GOLGA8JA6NMD2 632 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 LACTBL1A8MY62 500 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 RFXAPO00287 272 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 PDXKO00764 312 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 NRP1O14786 923 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 PSMA7O14818 248 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 CLIC2O15247 247 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 INPPL1O15357 1258 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 DDHD2O94830 711 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 ITGB1P05556 798 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 GALTP07902 379 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 TMEM191BP0C7N4 346 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 SRGAP2BP0DMP2 458 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 RPL9P32969 192 aaKnown RBP8.83□□□□□ -1
TM4SF1-204ENST00000493348 PBX3P40426 434 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 TNFSF9P41273 254 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 SLC11A1P49279 550 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 POU5F1Q01860 360 aaKnown RBP8.83□□□□□ -1
TM4SF1-204ENST00000493348 PLCB3Q01970 1234 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 EHHADHQ08426 723 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 KCNA1Q09470 495 aa8.83□□□□□ -1
TM4SF1-204ENST00000493348 ELAVL2Q12926 359 aaKnown RBP8.83□□□□□ -1
TM4SF1-204ENST00000493348 TMEM132DQ14C87 1099 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms