RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 EN2P19622 333 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-212ENST00000493341 NKX3-2P78367 333 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 TOMM20Q15388 145 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 TIGD6Q17RP2 521 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 FAM180BQ6P0A1 224 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 RFX8Q6ZV50 586 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 PROSER1Q86XN7 944 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 FAM126BQ8IXS8 530 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 GIMAP8Q8ND71 665 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-212ENST00000493341 IFI44Q8TCB0 444 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 USP13Q92995 863 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-212ENST00000493341 MRGPRX1Q96LB2 322 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
VPS13A-212ENST00000493341 WDCPQ9H6R7 721 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 LDAHQ9H6V9 325 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 POLR3BQ9NW08 1133 aaPredicted RBP5.49□□□□□ -1.53
VPS13A-212ENST00000493341 ARHGAP20Q9P2F6 1191 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 RABGAP1Q9Y3P9 1069 aa5.49□□□□□ -1.53
VPS13A-212ENST00000493341 PRR19A6NJB7 356 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 TCERG1O14776 1098 aaKnown RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 IRAK2O43187 625 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 PNLIPP16233 465 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 CNTFP26441 200 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ARL4CP56559 192 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 TLE1Q04724 770 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 CR1LQ2VPA4 569 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 KANK2Q63ZY3 851 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 JMJD6Q6NYC1 403 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 FBXO38Q6PIJ6 1188 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 BEND5Q7L4P6 421 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 PQLC1Q8N2U9 271 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ZGPATQ8N5A5 531 aaKnown RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SLC26A6Q9BXS9 759 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 HSPBP1Q9NZL4 362 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 CALCOCO1Q9P1Z2 691 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 A0A1W2PR48 441 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 NPC1O15118 1278 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ARHGAP6O43182 974 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 KCNJ5P48544 419 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 HTRA4P83105 476 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 MEF2AQ02078 507 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 UBE3CQ15386 1083 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 MST1LQ2TV78 715 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 FAAH2Q6GMR7 532 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 RETSATQ6NUM9 610 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ZNF574Q6ZN55 896 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SPRED2Q7Z698 418 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 MIB1Q86YT6 1006 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 GALNT15Q8N3T1 639 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 PCSK9Q8NBP7 692 aaKnown RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 OR6B3Q8NGW1 331 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 BCL7CQ8WUZ0 217 aaPredicted RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SNX33Q8WV41 574 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 LRRC46Q96FV0 321 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SNX22Q96L94 193 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 C1orf43Q9BWL3 253 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 HAPLN2Q9GZV7 340 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 MRPL46Q9H2W6 279 aaKnown RBP5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SERHLQ9NQF3 203 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 TPSG1Q9NRR2 321 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 GJD2Q9UKL4 321 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 ITGB1BP2Q9UKP3 347 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 SLC5A6Q9Y289 635 aa5.48□□□□□ -1.53
VPS13A-212ENST00000493341 AQP12BA6NM10 295 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 H0Y858 1186 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 PODXLO00592 558 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 N4BP3O15049 544 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 TBC1D4O60343 1298 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 AMY1AP04745 511 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 POLBP06746 335 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 IFIT1P09914 478 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 LTA4HP09960 611 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 MYL4P12829 197 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 HNRNPLP14866 589 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 HDCP19113 662 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 DDCP20711 480 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 PRDX5P30044 214 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 ADCY8P40145 1251 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 FLT3LGP49771 235 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SOX8P57073 446 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 EXOSC9Q06265 439 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SLC13A2Q13183 592 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 SPARCL1Q14515 664 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 NR1I3Q14994 352 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 RAB3GAP1Q15042 981 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 GJC2Q5T442 439 aaPredicted RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 RRAGBQ5VZM2 374 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 GRAMD4Q6IC98 578 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 C1orf122Q6ZSJ8 110 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 RNF44Q7L0R7 432 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 OTOP2Q7RTS6 562 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 AMIGO3Q86WK7 504 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 FANCBQ8NB91 859 aa5.47□□□□□ -1.53
VPS13A-212ENST00000493341 C1orf131Q8NDD1 294 aaKnown RBP5.47□□□□□ -1.53
VPS13A-212ENST00000493341 FBXO18Q8NFZ0 1043 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms