RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PAFAH1B1P43034 410 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 MAGEA9P43362 315 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.2
HERC4-211ENST00000492996 BMT2Q1RMZ1 405 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 CBWD6Q4V339 395 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 CBWD3Q5JTY5 395 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 CBWD5Q5RIA9 395 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 TMEM240Q5SV17 173 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 PLA2G4FQ68DD2 849 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 ALKBH5Q6P6C2 394 aaKnown RBP7.59□□□□□ -1.2
HERC4-211ENST00000492996 ZSWIM2Q8NEG5 633 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 HNRNPLLQ8WVV9 542 aaKnown RBP7.59□□□□□ -1.2
HERC4-211ENST00000492996 PPM1EQ8WY54 764 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 SYN2Q92777 582 aaPredicted RBP7.59□□□□□ -1.2
HERC4-211ENST00000492996 SLC24A3Q9HC58 644 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 VPS18Q9P253 973 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 RIPK3Q9Y572 518 aa7.59□□□□□ -1.2
HERC4-211ENST00000492996 GRIN2DO15399 1336 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 TCP1P17987 556 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 CPT1AP50416 773 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 ERVK-21P61565 698 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 TUBB4BP68371 445 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 MAPK7Q13164 816 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 ACVR2BQ13705 512 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 UGCGQ16739 394 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 DPY19L2P1Q6NXN4 242 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 USP38Q8NB14 1042 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 RDM1Q8NG50 284 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 ZNF689Q96CS4 500 aaPredicted RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 RIT2Q99578 217 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 KATNAL1Q9BW62 490 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 SIX2Q9NPC8 291 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 MYH11P35749 1972 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 GOLGA8IPA6NC78 632 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 GOLGA8JA6NMD2 632 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 DHX15O43143 795 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 RB1P06400 928 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 P4HBP07237 508 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 IBSPP21815 317 aaPredicted RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 FMO5P49326 533 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 BAATQ14032 418 aaPredicted RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 NAB2Q15742 525 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 TTC19Q6DKK2 380 aaPredicted RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 ARMCX2Q7L311 632 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 GOLGA5Q8TBA6 731 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 RIN2Q8WYP3 895 aaPredicted RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 CBWD1Q9BRT8 395 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 KIFC3Q9BVG8 833 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 AGO4Q9HCK5 861 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 PLCB1Q9NQ66 1216 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 RBM12Q9NTZ6 932 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 MTCL1Q9Y4B5 1905 aaKnown RBP7.58□□□□□ -1.2
HERC4-211ENST00000492996 FANCMQ8IYD8 2048 aa7.58□□□□□ -1.2
HERC4-211ENST00000492996 PI4K2BG5E9Z4 385 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RBAK-RBAKDNI3L0D1 243 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 SOX1O00570 391 aaPredicted RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 EIF3DO15371 548 aaKnown RBP eCLIP7.57□□□□□ -1.2
HERC4-211ENST00000492996 SLC16A4O15374 487 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 EVI5O60447 810 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 ABCB4P21439 1286 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 QARSP47897 775 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 ALDH5A1P51649 535 aaPredicted RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 PEX3P56589 373 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 DLG4P78352 724 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 PURAQ00577 322 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 UBE3AQ05086 875 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 DRAP1Q14919 205 aaPredicted RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 LEXMQ3ZCV2 418 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 XKR9Q5GH70 373 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 ARHGEF16Q5VV41 709 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 CCDC70Q6NSX1 233 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 WDR93Q6P2C0 686 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 B3GNT9Q6UX72 402 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RNF207Q6ZRF8 634 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 STXBP4Q6ZWJ1 553 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 GLYCTKQ8IVS8 523 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RPUSD2Q8IZ73 545 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 SH3TC2Q8TF17 1288 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 CLP1Q92989 425 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 ELMO3Q96BJ8 720 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RPGRIP1Q96KN7 1286 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RNF208Q9H0X6 261 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 LARSQ9P2J5 1176 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 NAGPAQ9UK23 515 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 DNAJC12Q9UKB3 198 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 FAN1Q9Y2M0 1017 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 TELO2Q9Y4R8 837 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 ABHD14A-ACY1A0A1B0GW23 586 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 ESYT3A0FGR9 886 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 GRID2IPA4D2P6 1211 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 ZSCAN5CA6NGD5 496 aaPredicted RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 CCDC169A6NNP5 214 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 SLC16A3O15427 465 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 PEX10O60683 326 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 EIF3JO75822 258 aaKnown RBP7.57□□□□□ -1.2
HERC4-211ENST00000492996 SCP2P22307 547 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 USP8P40818 1118 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 RARRES1P49788 294 aa7.57□□□□□ -1.2
HERC4-211ENST00000492996 SLC26A2P50443 739 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms