RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SURF1Q15526 300 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 FAM187BQ17R55 369 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 BRSK2Q8IWQ3 736 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 LMBR1Q8WVP7 490 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 KAT5Q92993 513 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 NLRP4Q96MN2 994 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 TLR10Q9BXR5 811 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 C1orf112Q9NSG2 853 aa15.14■□□□□ 0.01
PTPN7-216ENST00000492977 TTLL13PA6NNM8 815 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 INO80B-WBP1J3KQ70 363 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 ABLIM1O14639 778 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 SRGAP2O75044 1071 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 HLA-DRAP01903 254 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 SLC10A3P09131 477 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 ZNF286BP0CG31 522 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 USP8P40818 1118 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 PHKA2P46019 1235 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 GALCP54803 685 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 IGBP1P78318 339 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 ZBTB41Q5SVQ8 909 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 TDRD10Q5VZ19 366 aaKnown RBP15.13■□□□□ 0.01
PTPN7-216ENST00000492977 MPZL3Q6UWV2 235 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 C17orf99Q6UX52 265 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 TATDN2Q93075 761 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 INO80BQ9C086 356 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-216ENST00000492977 PTPRHQ9HD43 1115 aa15.13■□□□□ 0.01
PTPN7-216ENST00000492977 PRMT7Q9NVM4 692 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-216ENST00000492977 ARGLU1Q9NWB6 273 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-216ENST00000492977 GRID2IPA4D2P6 1211 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 ANKRD62A6NC57 917 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 TFRCP02786 760 aaKnown RBP15.12■□□□□ 0.01
PTPN7-216ENST00000492977 GZMAP12544 262 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 PIK3CAP42336 1068 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 NOP2P46087 812 aaKnown RBP15.12■□□□□ 0.01
PTPN7-216ENST00000492977 WNT7BP56706 349 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 BIRC3Q13489 604 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 ATF7IP2Q5U623 682 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 FBXO38Q6PIJ6 1188 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 MTHFD1LQ6UB35 978 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 ZBTB33Q86T24 672 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 EPS8L1Q8TE68 723 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 USP6NLQ92738 828 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 CALR3Q96L12 384 aaKnown RBP15.12■□□□□ 0.01
PTPN7-216ENST00000492977 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 RNF14Q9UBS8 474 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 NOCTQ9UK39 431 aaKnown RBP15.12■□□□□ 0.01
PTPN7-216ENST00000492977 CPSF3Q9UKF6 684 aaKnown RBP15.12■□□□□ 0.01
PTPN7-216ENST00000492977 TNFSF13BQ9Y275 285 aa15.12■□□□□ 0.01
PTPN7-216ENST00000492977 RRN3P2A6NIE6 340 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 CYP26A1O43174 497 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SGPL1O95470 568 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 VNN1O95497 513 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 GJB1P08034 283 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ITIH3Q06033 890 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 PPFIA1Q13136 1202 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 OLFML2BQ68BL8 750 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 LMBRD2Q68DH5 695 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ZNF572Q7Z3I7 529 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 CREG2Q8IUH2 290 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 RPUSD2Q8IZ73 545 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 TPCN2Q8NHX9 752 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SLC20A1Q8WUM9 679 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 CTNNBL1Q8WYA6 563 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 DHX38Q92620 1227 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 MMS19Q96T76 1030 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 PI4K2AQ9BTU6 479 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ISCUQ9H1K1 167 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 PDCL3Q9H2J4 239 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ZFYVE28Q9HCC9 887 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SEPT11Q9NVA2 429 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 GNEQ9Y223 722 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 DOCK3Q8IZD9 2030 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 NCANO14594 1321 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 PTPRJQ12913 1337 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ZSWIM8A7E2V4 1837 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 A6NJR5 290 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ZNF185O15231 689 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 RTN2O75298 545 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 TUBBP07437 444 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 CYP11B1P15538 503 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 ZSCAN20P17040 1043 aaPredicted RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 PDE6CP51160 858 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 BPIFB4P59827 614 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 POU5F1Q01860 360 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 GRIK4Q16099 956 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SMYD5Q6GMV2 418 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 NFRKBQ6P4R8 1299 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 NOP9Q86U38 636 aaKnown RBP15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SLC47A2Q86VL8 602 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 SYCE1Q8N0S2 351 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 LRRC57Q8N9N7 239 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 CAGE1Q8TC20 777 aa15.11■□□□□ 0.01
PTPN7-216ENST00000492977 RFFLQ8WZ73 363 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms