RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 OSTNP61366 133 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 ASIC1P78348 528 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 TFF2Q03403 129 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 COASYQ13057 564 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 DUSP6Q16828 381 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 PUS10Q3MIT2 529 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 LEXMQ3ZCV2 418 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 ZC2HC1CQ53FD0 456 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 L1TD1Q5T7N2 865 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 SLFN12LQ6IEE8 588 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 ALKAL1Q6UXT8 129 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 STXBP4Q6ZWJ1 553 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 RNF168Q8IYW5 571 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 MRPL43Q8N983 215 aaKnown RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 STAMQ92783 540 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 CHAMP1Q96JM3 812 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 UROC1Q96N76 676 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 HERC2P3Q9BVR0 1158 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 VN1R3Q9BXE9 311 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 IGFLR1Q9H665 355 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 SSX2IPQ9Y2D8 614 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 TRIP11Q15643 1979 aa11.64□□□□□ -0.55
CDC42SE1-206ENST00000492796 SF3B1O75533 1304 aaKnown RBP eCLIP11.63□□□□□ -0.559e-7■■■■■ 35.8
CDC42SE1-206ENST00000492796 A0A0B4J269 797 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 SMIM28A0A1B0GU29 152 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 C2orf71A6NGG8 1288 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 OGTO15294 1046 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 EFEMP2O95967 443 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 MYL1P05976 194 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 URODP06132 367 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 SLFN14P0C7P3 912 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 KCNE1P15382 129 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.559e-8■■■□□ 17.1
CDC42SE1-206ENST00000492796 NDUFV1P49821 464 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 ADAM15Q13444 863 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 PTPN14Q15678 1187 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 GLRA4Q5JXX5 417 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 FUT10Q6P4F1 479 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 SLC39A4Q6P5W5 647 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 UNC13DQ70J99 1090 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 RBM23Q86U06 439 aaKnown RBP11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 ACCSQ96QU6 501 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 TSPAN18Q96SJ8 248 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 MSTO1Q9BUK6 570 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 HAPLN2Q9GZV7 340 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 CXCL16Q9H2A7 254 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 TMEM206Q9H813 350 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 PLEKHA5Q9HAU0 1116 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 TBC1D7Q9P0N9 293 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 STYXL1Q9Y6J8 313 aa11.63□□□□□ -0.55
CDC42SE1-206ENST00000492796 UNC80Q8N2C7 3258 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 UBE4BO95155 1302 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 A0A1B0GVL5 298 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 CASTOR2A6NHX0 329 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 TMEM189-UBE2V1I3L0A0 370 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 EIF3DO15371 548 aaKnown RBP eCLIP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 ACTN4O43707 911 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 FAM189A1O60320 539 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 TBX10O75333 385 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 TADA2AO75478 443 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 CXCL14O95715 111 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 CA8P35219 290 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 LTBRP36941 435 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 ANP32AP39687 249 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 SYKP43405 635 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 GLUD2P49448 558 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 CASP5P51878 434 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 POU5F1Q01860 360 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 ELAVL2Q12926 359 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 POSTNQ15063 836 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 TMEM184AQ6ZMB5 413 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 EP400NLQ6ZTU2 488 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 CD302Q8IX05 232 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 GPR65Q8IYL9 337 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 EMILIN2Q9BXX0 1053 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 MRPL17Q9NRX2 175 aaKnown RBP11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 SERTAD1Q9UHV2 236 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 FAM50BQ9Y247 325 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 REV3LO60673 3130 aa11.62□□□□□ -0.55
CDC42SE1-206ENST00000492796 PVALEFA0A1B0GWK0 134 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 TTC26A0AVF1 554 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 F8W810 466 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 H3BQ06 376 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 PER2O15055 1255 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 LINC01565O15544 149 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 MEFVO15553 781 aaPredicted RBP11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 KIF4AO95239 1232 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 GLP2RO95838 553 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 ADRB2P07550 413 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 CXCL8P10145 99 aa11.61□□□□□ -0.55
CDC42SE1-206ENST00000492796 MYBP10242 640 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms